Professor Steve Chenoweth
Head of School & Head of School, School of the Environment
School of the Environment
+61 7 336 59145
Researcher biography
Our lab aims to test fundamental hypotheses in genetics and evolutionary biology. Principally, we are interested the relationship between genotypic and phenotypic change during adaptive evolution. This line of inquiry requires an understanding of both the type of selection acting on traits as they evolve and ultimately the functional polymorphisms available for selection to act upon. We presently use both native and exotic species of Drosophila in our work but also undertake collaborative study in other organisms that represent examples of recurring ecological and evolutionary phenomena. We are equipped to use a broad range of techniques in our investigations including experimental evolution, field-based selection studies, quantitative genetics, molecular population genetics, genomics and advanced quantitative methods in statistics and computational biology. The broad range of techniques available to our group provides students with a unique opportunity to broaden their skill sets as they address fundamental questions.
Book Chapter
Chenoweth, Stephen F., Hunt, John and Rundle, Howard D. (2012). Analyzing and comparing the geometry of individual fitness surfaces. The adaptive landscape in evolutionary biology. (pp. 126-149) edited by Erik Svensson and Ryan Calsbeek. Oxford, United Kingdom: Oxford University Press.
Journal Articles
Wang, Yiguan, Allen, Scott L., Reddiex, Adam J. and Chenoweth, Stephen F. (2024). The impacts of positive selection on genomic variation in Drosophila serrata: Insights from a deep learning approach. Molecular Ecology, 33 (18) e17499, e17499. doi: 10.1111/mec.17499
Narayan, Vikram P., Wasana, Nidarshani, Wilson, Alastair J. and Chenoweth, Stephen F. (2024). Misalignment of plastic and evolutionary responses of lifespan to novel carbohydrate diets. Royal Society Open Science, 11 (1) 231732, 231732. doi: 10.1098/rsos.231732
Kannan, Ashvitha, Dugand, Robert J., Appleton, Nicholas C., Chenoweth, Stephen F., Sgrò, Carla M. and McGuigan, Katrina (2023). Environmental dependence of mutational (co)variances of adaptive traits. Evolution, 77 (11), 2341-2351. doi: 10.1093/evolut/qpad154
Novelo, Mario, Dutra, Heverton LC, Metz, Hillery C., Jones, Matthew J., Sigle, Leah T., Frentiu, Francesca D., Allen, Scott L., Chenoweth, Stephen F. and McGraw, Elizabeth A. (2023). Dengue and chikungunya virus loads in the mosquito Aedes aegypti are determined by distinct genetic architectures. PLoS Pathogens, 19 (4) e1011307, e1011307. doi: 10.1371/journal.ppat.1011307
Hine, Emma, Runcie, Daniel E., Allen, Scott L., Wang, Yiguan, Chenoweth, Stephen F., Blows, Mark W. and McGuigan, Katrina (2022). Maintenance of quantitative genetic variance in complex, multitrait phenotypes: the contribution of rare, large effect variants in 2 Drosophila species. Genetics, 222 (2) iyac122, 1-17. doi: 10.1093/genetics/iyac122
Rusuwa, Bosco B., Chung, Henry, Allen, Scott L., Frentiu, Francesca D. and Chenoweth, Stephen F. (2022). Natural variation at a single gene generates sexual antagonism across fitness components in Drosophila. Current Biology, 32 (14), 3161-3169.e7. doi: 10.1016/j.cub.2022.05.038
Narayan, Vikram P., Wilson, Alastair J. and Chenoweth, Stephen F. (2022). Genetic and social contributions to sex differences in lifespan in Drosophila serrata. Journal of Evolutionary Biology, 35 (4), 657-663. doi: 10.1111/jeb.13992
Reddiex, Adam J. and Chenoweth, Stephen F. (2021). Integrating genomics and multivariate evolutionary quantitative genetics: a case study of constraints on sexual selection in Drosophila serrata. Proceedings of the Royal Society B: Biological Sciences, 288 (1960) 20211785, 20211785-197. doi: 10.1098/rspb.2021.1785
Dutra, Heverton L. C., Ford, Suzanne A., Allen, Scott L., Bordenstein, Sarah R., Chenoweth, Stephen F., Bordenstein, Seth R. and McGraw, Elizabeth A. (2021). The impact of artificial selection for Wolbachia-mediated dengue virus blocking on phage WO. PLoS Neglected Tropical Diseases, 15 (7) e0009637, e0009637. doi: 10.1371/journal.pntd.0009637
Ford, Suzanne A., Albert, Istvan, Allen, Scott L., Chenoweth, Stephen F., Jones, Matthew, Koh, Cassandra, Sebastian, Aswathy, Sigle, Leah T. and McGraw, Elizabeth A. (2020). Artificial selection finds new hypotheses for the mechanism of Wolbachia-mediated dengue blocking in mosquitoes. Frontiers in Microbiology, 11 1456, 1456. doi: 10.3389/fmicb.2020.01456
Ford, Suzanne A., Allen, Scott L., Ohm, Johanna R., Sigle, Leah T., Sebastian, Aswathy, Albert, Istvan, Chenoweth, Stephen F. and McGraw, Elizabeth A. (2019). Selection on Aedes aegypti alters Wolbachia-mediated dengue virus blocking and fitness. Nature Microbiology, 4 (11), 1832-1839. doi: 10.1038/s41564-019-0533-3
White, Craig R., Marshall, Dustin J., Alton, Lesley A., Arnold, Pieter A., Beaman, Julian E., Bywater, Candice L., Condon, Catriona, Crispin, Taryn S., Janetzki, Aidan, Pirtle, Elia, Winwood-Smith, Hugh S., Angilletta, Michael J., Chenoweth, Stephen F., Franklin, Craig E., Halsey, Lewis G., Kearney, Michael R., Portugal, Steven J. and Ortiz-Barrientos, Daniel (2019). The origin and maintenance of metabolic allometry in animals. Nature Ecology and Evolution, 3 (4), 598-603. doi: 10.1038/s41559-019-0839-9
Connallon, Tim and Chenoweth, Stephen F. (2019). Dominance reversals and the maintenance of genetic variation for fitness. Plos Biology, 17 (1) e3000118, e3000118. doi: 10.1371/journal.pbio.3000118
Koh, Cassandra, Allen, Scott L., Herbert, Rosemarie I., McGraw, Elizabeth A. and Chenoweth, Stephen F. (2018). The transcriptional response of Aedes aegypti with variable extrinsic incubation periods for dengue virus. Genome Biology and Evolution, 10 (12), 3141-3151. doi: 10.1093/gbe/evy230
Allen, Scott L., Bonduriansky, Russell and Chenoweth, Stephen F. (2018). Genetic constraints on microevolutionary divergence of sex-biased gene expression. Philosophical Transactions of the Royal Society B: Biological Sciences, 373 (1757) 20170427, 20170427. doi: 10.1098/rstb.2017.0427
Rowe, Locke, Chenoweth, Stephen F. and Agrawal, Aneil F. (2018). The genomics of sexual conflict. American Naturalist, 192 (2), 274-286. doi: 10.1086/698198
Gosden, Thomas P., Reddiex, Adam J. and Chenoweth, Stephen F. (2018). Artificial selection reveals sex differences in the genetic basis of sexual attractiveness. Proceedings of the National Academy of Sciences, 115 (21), 5498-5503. doi: 10.1073/pnas.1720368115
Collet, Julie M., McGuigan, Katrina, Allen, Scott L., Chenoweth, Stephen F. and Blows, Mark W. (2018). Mutational pleiotropy and the strength of stabilizing selection within and between functional modules of gene expression. Genetics, 208 (4), 1601-1616. doi: 10.1534/genetics.118.300776
Reddiex, Adam J., Allen, Scott L. and Chenoweth, Stephen F. (2018). A genomic reference panel for Drosophila serrata. G3: Genes, Genomes, Genetics, 8 (4), 1335-1346. doi: 10.1534/g3.117.300487
Terradas, Gerard, Allen, Scott L., Chenoweth, Stephen F. and McGraw, Elizabeth A. (2017). Family level variation in Wolbachia-mediated dengue virus blocking in Aedes aegypti. Parasites and Vectors, 10 (1) 622, 1-12. doi: 10.1186/s13071-017-2589-3
Chenoweth, Stephen F. and Hunt, John (2017). Allowing nature to be nurture: a comment on Bailey et al. Behavioral Ecology, 29 (1), 16-17. doi: 10.1093/beheco/arx169
Allen, Scott L., McGuigan, Katrina, Connallon, Tim, Blows, Mark W. and Chenoweth, Stephen F. (2017). Sexual selection on spontaneous mutations strengthens the between-sex genetic correlation for fitness. Evolution, 71 (10), 2398-2409. doi: 10.1111/evo.13310
Allen, Scott L., Delaney, Emily K., Kopp, Artyom and Chenoweth, Stephen F. (2017). Single-molecule sequencing of the Drosophila serrata genome. G3 , 7 (3), 781-788. doi: 10.1534/g3.116.037598
Allen, Scott L. , Bonduriansky, Russell, Sgro, Carla M. and Chenoweth, Stephen F. (2017). Sex-biased transcriptome divergence along a latitudinal gradient. Molecular Ecology, 26 (5), 1256-1272. doi: 10.1111/mec.14015
Ye, Yixin H., Chenoweth, Stephen F., Carrasco, Alison M., Allen, Scott L., Frentiu, Francesca D., van den Hurk, Andrew F., Beebe, Nigel W. and McGraw, Elizabeth A. (2016). Evolutionary potential of the extrinsic incubation period of dengue virus in Aedes aegypti. Evolution, 70 (11), 2459-2469. doi: 10.1111/evo.13039
Yassin, Amir, Delaney, Emily K., Reddiex, Adam J., Seher, Thaddeus D., Bastide, Heloise, Appleton, Nicholas C., Lack, Justin B., David, Jean R., Chenoweth, Stephen F., Pool, John E. and Kopp, Artyom (2016). The pdm3 locus is a hotspot for recurrent evolution of female-limited color dimorphism in Drosophila. Current Biology, 26 (18), 2412-2422. doi: 10.1016/j.cub.2016.07.016
Gosden, T. P., Thomson, J. R., Blows, M. W., Schaul, A. and Chenoweth, S. F. (2016). Testing for a genetic response to sexual selection in a wild Drosophila population. Journal of Evolutionary Biology, 29 (6), 1278-1283. doi: 10.1111/jeb.12851
Ivory-Church, J., Frentiu, F. D. and Chenoweth, S. F. (2015). Polymorphisms in a desaturase 2 ortholog associate with cuticular hydrocarbon and male mating success variation in a natural population of Drosophila serrata. Journal of Evolutionary Biology, 28 (9), 1600-1609. doi: 10.1111/jeb.12679
Chenoweth, Stephen F., Appleton, Nicholas C., Allen, Scott L. and Rundle, Howard D. (2015). Genomic evidence that sexual selection impedes adaptation to a novel environment. Current Biology, 25 (14), 1860-1866. doi: 10.1016/j.cub.2015.05.034
Blows, Mark W., Allen, Scott L., Collet, Julie M., Chenoweth, Stephen F. and McGuigan, Katrina (2015). The phenome-wide distribution of genetic variance. American Naturalist, 186 (1), 15-30. doi: 10.1086/681645
Ye, Yixin H., Carrasco, Alison M., Frentiu, Francesca D., Chenoweth, Stephen F., Beebe, Nigel W., van den Hurk, Andrew F., Simmons, Cameron P., O'Neill, Scott L. and McGraw, Elizabeth A. (2015). Wolbachia reduces the transmission potential of dengue-infected Aedes aegypti. PLoS Neglected Tropical Diseases, 9 (6) e0003894, 1-19. doi: 10.1371/journal.pntd.0003894
Chenoweth, Stephen F. and Gosden, Thomas P. (2015). Variation and selection on preference functions: a comment on Edward. Behavioral Ecology, 26 (2), 322-323. doi: 10.1093/beheco/aru233
Latimer, C. A. L., Foley, B. R. and Chenoweth, S. F. (2015). Connecting thermal performance curve variation to the genotype: a multivariate QTL approach. Journal of Evolutionary Biology, 28 (1), 155-168. doi: 10.1111/jeb.12552
Gosden, T. P., Rundle, H. D. and Chenoweth, S. F. (2014). Testing the correlated response hypothesis for the evolution and maintenance of male mating preferences in Drosophila serrata. Journal of Evolutionary Biology, 27 (10), 2106-2112. doi: 10.1111/jeb.12461
McGuigan, Katrina, Collet, Julie M., Allen, Scott L., Chenoweth, Stephen F. and Blows, Mark W. (2014). Pleiotropic mutations are subject to strong stabilizing selection. Genetics, 197 (3), 1051-1062. doi: 10.1534/genetics.114.165720
McGuigan, Katrina, Collet, Julie M., McGraw, Elizabeth A., Ye, Yixin H., Allen, Scott L., Chenoweth, Stephen F. and Blows, Mark W. (2014). The nature and extent of mutational pleiotropy in gene expression of male Drosophila serrata. Genetics, 196 (3), 911-921. doi: 10.1534/genetics.114.161232
Cassidy, Elizabeth J., Bath, Eleanor, Chenoweth, Stephen F. and Bonduriansky, Russell (2014). Sex-specific patterns of morphological diversification: evolution of reaction norms and static allometries in neriid flies. Evolution, 68 (2), 368-383. doi: 10.1111/evo.12276
Gosden, Thomas P. and Chenoweth, Stephen F. (2014). The evolutionary stability of cross-sex, cross-trait genetic covariances. Evolution, 68 (6), 1687-1697. doi: 10.1111/evo.12398
Latimer, Camille A. L., McGuigan, Katrina, Wilson, Robbie S., Blows, Mark W. and Chenoweth, Stephen F. (2014). The contribution of spontaneous mutations to thermal sensitivity curve variation in drosophila serrata. Evolution, 68 (6), 1824-1837. doi: 10.1111/evo.12392
Allen, Scott L., Bonduriansky, Russell and Chenoweth, Stephen F. (2013). The genomic distribution of sex-biased genes in Drosophila serrata: X chromosome demasculinization, feminization, and hyperexpression in both sexes. Genome Biology and Evolution, 5 (10), 1986-1994. doi: 10.1093/gbe/evt145
Reddiex, Adam J., Gosden, Thomas P., Bonduriansky, Russell and Chenoweth, Stephen F. (2013). Sex-specific fitness consequences of nutrient intake and the evolvability of diet preferences. American Naturalist, 182 (1), 91-102. doi: 10.1086/670649
Innocenti, Paolo and Chenoweth, Stephen F. (2013). Interspecific divergence of transcription networks along lines of genetic variance in Drosophila: dimensionality, evolvability, and constraint. Molecular Biology and Evolution, 30 (6), 1358-1367. doi: 10.1093/molbev/mst047
Hallsson, L. R., Chenoweth, S. F. and Bonduriansky, R. (2012). The relative importance of genetic and nongenetic inheritance in relation to trait plasticity in Callosobruchus maculatus. Journal of Evolutionary Biology, 25 (12), 2422-2431. doi: 10.1111/jeb.12014
Gosden, Thomas P., Shastri, Krishna-Lila, Innocenti, Paolo and Chenoweth, Stephen F. (2012). The B-matrix harbors significant and sex-specific constraints on the evolution of multicharacter sexual dimorphism. Evolution, 66 (7), 2106-2116. doi: 10.1111/j.1558-5646.2012.01579.x
Stocker, Ann J., Rusuwa, Bosco B., Blacket, Mark J., Frentiu, Francesca D., Sullivan, Mitchell, Foley, Bradley R., Beatson, Scott, Hoffman, Ary A. and Chenoweth, Stephen F. (2012). Physical and linkage maps for Drosophila serrata, a model species for studies of clinal adaptation and sexual selection. G3: Genes, Genomes, Genetics, 2 (2), 287-297. doi: 10.1534/g3.111.001354
McGraw, Elizabeth A., Ye, Yixin H., Foley, Brad, Chenoweth, Stephen F., Higgie, Megan, Hine, Emma and Blows, Mark W. (2011). High-dimensional variance partitioning reveals the modular genetic basis of adaptive divergence in gene expressionduring reproductive character displacement. Evolution, 65 (11), 3126-3137. doi: 10.1111/j.1558-5646.2011.01371.x
Latimer, C. A. L., Wilson, R. S. and Chenoweth, S. F. (2011). Quantitative genetic variation for thermal performance curves within and among natural populations of Drosophila serrata. Journal of Evolutionary Biology, 24 (5), 965-975. doi: 10.1111/j.1420-9101.2011.02227.x
Gosden, T. P. and Chenoweth, S. F. (2011). On the evolution of heightened condition dependence of male sexual displays. Journal of Evolutionary Biology, 24 (3), 685-692. doi: 10.1111/j.1420-9101.2010.02205.x
Rundle, Howard D. and Chenoweth, Stephen F. (2011). Stronger convex (stabilizing) selection on homologous sexual display traits in females than in males: A multipopulation comparison in Drosophila serrata. Evolution, 65 (3), 893-899. doi: 10.1111/j.1558-5646.2010.01158.x
Chenoweth, Stephen F. and McGuigan, Katrina (2010). The genetic basis of sexually selected variation. Annual Review of Ecology Evolution and Systematics, 41, 81-101. doi: 10.1146/annurev-ecolsys-102209-144657
Condon, Catriona H., Chenoweth, Stephen F. and Wilson, Robbie S. (2010). Zebrafish take their cue from temperature but not photoperiod for the seasonal plasticity of thermal performance. Journal of Experimental Biology, 213 (21), 3705-3709. doi: 10.1242/jeb.046979
Frentiu, Francesca. D and Chenoweth, Stephen. F (2010). Clines in cuticular hydrocarbons in two drosophila species with independent population histories. Evolution, 64 (6), 1784-1794. doi: 10.1111/j.1558-5646.2009.00936.x
Chenoweth, Stephen F., Rundle, Howard D. and Blows, Mark W. (2010). Experimental evidence for the evolution of indirect genetic effects: Changes in the interaction effect coefficient, psi (ψ), due to sexual selection. Evolution, 64 (6), 1849-1856. doi: 10.1111/j.1558-5646.2010.00952.x
Chenoweth, Stephen F., Rundle, Howard D. and Blows, Mark W. (2010). The contribution of selection and genetic constraints to phenotypic divergence. American Naturalist, 175 (2), 186-196. doi: 10.1086/649594
Rundle, H.D., Chenoweth, S.F. and Blows, M.W. (2009). The diversification of mate preferences by natural and sexual selection. Journal of Evolutionary Biology, 22 (8), 1608-1615. doi: 10.1111/j.1420-9101.2009.01773.x
Hine, E, Chenoweth, SF, Rundle, HD and Blows, MW (2009). Characterizing the evolution of genetic variance using genetic covariance tensors. Philosphical Transactions of the Royal Society B-Biological Sciences, 364 (1523), 1567-1578. doi: 10.1098/rstb.2008.0313
Bonduriansky, Russell and Chenoweth, Stephen F. (2009). Intralocous sexual conflict. Trends In Ecology and Evolution, 24 (5), 280-288. doi: 10.1016/j.tree.2008.12.005
Ye, Yixin H., Chenoweth, Stephen F. and McGraw, Elizabeth A. (2009). Effective but costly, evolved mechanisms of defense against a virulent opportunistic pathogen in Drosophila melanogaster. PLoS Pathogens, 5 (4), e1000385.1-e1000385.9. doi: 10.1371/journal.ppat.1000385
Chenoweth, SF and Visscher, PM (2009). Association Mapping in Outbred Populations: Power and Efficiency When Genotyping Parents and Phenotyping Progeny. Genetics, 181 (2), 755-765. doi: 10.1534/genetics.108.099218
Frentiu, Francesca D., Adamski, Marcin, McGraw, Elizabeth A., Blows, Mark W. and Chenoweth, Stephen F. (2009). An expressed sequence tag (EST) library for Drosophila serrata, a model system for sexual selection and climatic adaptation studies. BMC Genomics, 10 (40) 40, 1-10. doi: 10.1186/1471-2164-10-40
Chenoweth, Stephen F. and Blows, Mark W. (2008). Qst meets the G matrix: The dimensionality of adaptive divergence in multiple correlated quantitative traits. Evolution, 62 (6), 1437-1449. doi: 10.1111/j.1558-5646.2008.00374.x
Rundle, H. D., Chenoweth, S. F. and Blows, M. W. (2008). Comparing Complex Fitness Surfaces: Among-Population Variation in Mutual Sexual Selection in Drosophila serrata. American Naturalist, 171 (4), 443-454. doi: 10.1086/528963
Frentiu, F. and Chenoweth, S. F. (2008). Polyandry and Paternity Skew in Natural and Experimental Populations of Drosophila serrata. Molecular Ecology, 17 (6), 1589-1596. doi: 10.1111/j.1365-294X.2008.03693.x
Chenoweth, S. F., Rundle, H. D. and Blows, M. W. (2008). Genetic Constraints and the Evolution of Display Trait Sexual Dimorphism by Natural and Sexual Selection.. American Naturalist, 171 (1), 22-34. doi: 10.1086/523946
Foley, B., Chenoweth, S. F., Nuzhdin, S. V. and Blows, M. W. (2007). Natural genetic variation in cuticular hydrocarbon expression in male and female Drosophila melanogaster. Genetics, 175 (3), 1465-1477. doi: 10.1534/genetics.106.065771
Chenoweth, S. F., Petfield, D., Doughty, P. and Blows, M. W. (2007). Male choice generates stabilizing sexual selection on a female fecundity correlate. Journal of Evolutionary Biology, 20 (5), 1745-1750. doi: 10.1111/j.1420-9101.2007.01390.x
Cook, P. E., Hugo, L. E., Iturbe-Ormaetxe, I., Williams, C. R., Chenoweth, S. F., Ritchie, S. A., Ryan, P. A., Kay, B. H., Blows, M. W. and O'Neill, S. L. (2007). Predicting the age of mosquitoes using transcriptional profiles. Nature Protocols, 2 (11), 2796-2806. doi: 10.1038/nprot.2007.396
Cook, P. E., Hugo, L. E., Iturbe-Ormaetxe, I., Williams, C. R., Chenoweth, S. F., Ritchie, S. A., Ryan, P. A., Kay, B. H., Blows, M. W. and O'Neill, S. L. (2006). The use of transcriptional profiles to predict adult mosquito age under field conditions. Proceedings of the National Academy of Sciences of the United States of America, 103 (48), 18060-18065. doi: 10.1073/pnas.0604875103
Rundle, H. D., Chenoweth, S. F. and Blows, M. W. (2006). The roles of natural and sexual selection during adaptation to a novel environment. Evolution, 60 (11), 2218-2225. doi: 10.1554/06-249.1
Chenoweth, S. F., Doughty, P. and Kokko, H. (2006). Can non-directional male mating preferences facilitate honest female ornamentation?. Ecology Letters, 9 (2), 179-184. doi: 10.1111/j.1461-0248.2005.00861.x
Chenoweth, S. F. and Blows, M. W. (2006). Dissecting the complex genetic basis of mate choice. Nature Reviews Genetics, 7 (9), 681-692. doi: 10.1038/nrg1924
Rundle, Howard D., Chenoweth, Stephen F., Doughty, Paul and Blows, Mark W. (2005). Divergent selection and the evolution of signal traits and mating preferences. Plos Biology, 3 (11) e368, 1988-1995. doi: 10.1371/journal.pbio.0030368
Petfield, Donna, Chenoweth, Stephen F., Rundle, Howard D. and Blows, Mark W. (2005). Genetic variance in female condition predicts indirect genetic variance in male sexual display traits. Proceedings of The National Academy of Sciences of the United States of America, 102 (17), 6045-6050. doi: 10.1073/pnas.0409378102
McGuigan, K., Chenoweth, S. F. and Blows, M. W. (2005). Phenotypic divergence along lines of genetic variance. American Naturalist, 165 (1), 32-43. doi: 10.1086/426600
Chenoweth, S. F. and Blows, M. W. (2005). Contrasting mutual sexual selection on homologous signal traits in Drosophila serrata. American Naturalist, 165 (2), 281-289. doi: 10.1086/427271
Hine, E. J., Chenoweth, S. F. and Blows, M. W. (2004). Multivariate quantitative genetics and the Lek Paradox: genetic variance in male sexually selected traits of Drosophila serrata under field control. Evolution, 58 (12), 2754-2762. doi: 10.1554/04-558
Blows, Mark W., Chenoweth, Stephen F. and Hine, Emma (2004). Orientation of the genetic variance-covariance matrix and the fitness surface for multiple male sexually selected traits. American Naturalist, 163 (3), 329-340. doi: 10.1086/381941
Chenoweth, S. F. and Hughes, J. M. (2003). Speciation and phylogeography in Caridina indistincta, a complex of freshwater shrimps from Australian heathland streams. Marine And Freshwater Research, 54 (7), 807-812. doi: 10.1071/MF02168
Chenoweth, S. F. and Hughes, J. M. (2003). Oceanic interchange and nonequilibrium population structure in the estuarine dependent Indo-Pacific tasselfish, Polynemus sheridani. Molecular Ecology, 12 (9), 2387-2397. doi: 10.1046/j.1365-294X.2003.01921.x
Chenoweth, Stephen F. and Blows, Mark W. (2003). Signal trait sexual dimorphism and mutual sexual selection in Drosophila serrata. Evolution, 57 (10), 2326-2334. doi: 10.1554/02-754
Chenoweth, S. F., Hughes, J. M. and Connolly, R. C. (2002). Phylogeography of the pipefish, Urocampus carinirostris, suggests secondary intergradation of ancient lineages. Marine Biology, 141 (3), 541-547. doi: 10.1007/s00227-002-0836-3
Johnson, J. W., Randall, J. E. and Chenoweth, S. F. (2001). Diagramma Melanacrum new species of haemulid fish from Indonesia, Borneo and the Philippines with a generic review. Memoirs of the Queensland Museum, 46 (2), 657-676.
Higgie, M., Chenoweth, S. and Blows, M. W. (2000). Natural Selection And The Reinforcement Of Mate Recognition. Science, 290 (5491), 519-521. doi: 10.1126/science.290.5491.519
Hughes, Jane, Ponniah, Mark, Hurwood, David, Chenoweth, Stephen and Arthington, Angela (1999). Strong genetic structuring in a habitat specialist, the Oxleyan Pygmy Perch Nannoperca oxleyana. Heredity, 83 (1), 5-14. doi: 10.1038/sj.hdy.6885390
Chenoweth, Stephen F., Hughes, Jane M., Keenan, Clive P. and Lavery, Shane (1998). Concordance between dispersal and mitochondrial gene flow: isolation by distance in a tropical teleost, Lates calcarifer (Australian barramundi). Heredity, 80 (2), 187-197. doi: 10.1038/sj.hdy.6882920
Chenoweth, S. F., Hughes, J. M., Keenan, C. P. and Lavery, S. (1998). When oceans meet: a teleost shows secondary intergradation at an Indian-Pacific interface. Proceedings of The Royal Society of London Series B, 265 (1394), 415-420. doi: 10.1098/rspb.1998.0310
Chenoweth, SF and Hughes, JM (1997). Genetic population structure of the catadromous perciform: Macquaria novemaculeata (Percichthyidae). Journal of Fish Biology, 50 (4), 721-733. doi: 10.1006/jfbi.1996.0336
Conference Papers
Ford, Suzanne, Allen, Scott, Sebastian, Aswathy, Albert, Istvan, Chenoweth, Stephen and McGraw, Elizabeth (2019). Using evolutionary approaches to dissect the genetic basis of Wolbachia-mediated blocking of dengue virus in Aedes aegypti. 68th Annual Meeting of the American Society for Tropical Medicine and Hygiene (ASTMH), National Harbor, MD, United States, 20 - 24 November 2019. Deerfield, IL, United States: American Society of Tropical Medicine and Hygiene. doi: 10.4269/ajtmh.abstract2019
Koh, Cassandra, Allen, Scott L., Herbert, Rosemarie I., McGraw, Elizabeth A. and Chenoweth, Stephen F. (2017). Differential transcriptomic responses associated with Denv Eip in Aedes aegypti. 66th Annual Meeting of the American-Society-of-Tropical-Medicine-and-Hygiene (ASTMH), Baltimore, MD, United States, 5-9 November 2017. Deerfield, IL, United States: American Society of Tropical Medicine and Hygiene.
Terradas, Gerard, Allen, Scott L., Chenoweth, Stephen F. and McGraw, Elizabeth A. (2017). Genetic architecture of Wolbachia-mediated dengue virus blocking in Aedes aegypti. 66th Annual Meeting of the American Society of Tropical Medicine and Hygiene (ASTMH), Baltimore, MD United States, 5 - 9 November 2017. Deerfield, IL United States: American Society of Tropical Medicine and Hygiene.
Condon, C. H., Chenoweth, S. F. and Wilson, R. S. (2011). The evolution of acclimation of thermal performance. Annual Meeting of the Society-for-Integrative-and-Comparative-Biology, Salt Lake City Ut, Jan 03-07, 2011. CARY: OXFORD UNIV PRESS INC.
Condon, C. H., Chenoweth, S. F. and Wilson, R. S. (2010). Genetic variation in the plasticity of thermal performance in the zebrafish, Danio rerio. Annual Meeting of the Society-for-Integrative-and-Comparative-Biology, Seattle Wa, Jan 03-07, 2010. CARY: OXFORD UNIV PRESS INC.
Condon, C. H., Chenoweth, S. F. and Wilson, R. S. (2009). Mixed signals: thermal performance of zebrafish Danio rerio in uncertain environments. Annual Meeting of the Society-for-Integrative-and-Comparative-Biology, Boston Ma, Jan 03-07, 2009. CARY: OXFORD UNIV PRESS INC.
Data Collections
Allen, Scott and Chenoweth, Steve (2024). Drosophila serrata genome scaffolding and annotation. The University of Queensland. (Dataset) doi: 10.48610/ce96855
Hine, Emma, Runcie, Daniel E. , Allen, Scott L. , Wang, Yiguan , Chenoweth, Stephen F. , Blows, Mark W. and McGuigan, Katrina (2021). R code and input files required to generate figures and tables for BSFG analysis of standing variance in two Drosophila datasets. This dataset is the current version and supercedes any earlier versions.. The University of Queensland. (Dataset) doi: 10.48610/a3c5652
Hine, Emma, Runcie, Daniel E., Allen, Scott L., Wang, Yiguan, Chenoweth, Stephen F., Blows, Mark W. and McGuigan, Katrina (2021). Enrichment analysis results for heritable common factors of Drosophila gene expression. The University of Queensland. (Dataset) doi: 10.48610/90441fc
Hine, Emma, Runcie, Daniel E., Allen, Scott L., Wang, Yiguan, Chenoweth, Stephen F., Blows, Mark W. and McGuigan, Katrina (2021). R code used to implement Bayesian sparse factor genetic analysis of Drosophila gene expression.. The University of Queensland. (Dataset) doi: 10.48610/ec9b92c
Hine, Emma , Runcie, Daniel E., Allen, Scott L., Wang, Yiguan, Chenoweth, Stephen F. , Blows, Mark W. and McGuigan, Katrina (2021). Two Drosophila datasets used in the Bayesian sparse factor analysis of standing genetic variance in 3385 gene expression traits. The University of Queensland. (Dataset) doi: 10.48610/f3eede4