Professor John Pandolfi

Yasuhara, Moriaki, Huang, Huai-Hsuan May, Reuter, Markus, Tian, Skye Yunshu, Cybulski, Jonathan D., O'Dea, Aaron, Mamo, Briony L., Cotton, Laura J., Martino, Emanuela Di, Feng, Ran, Tabor, Clay R., Reygondeau, Gabriel, Zhao, Qianshuo, Warne, Mark T., Aye, Kyawt K. T., Zhang, Jingwen, Chao, Anne, Wei, Chih-Lin, Condamine, Fabien L., Kocsis, Adam T., Kiessling, Wolfgang, Costello, Mark J., Tittensor, Derek R., Chaudhary, Chhaya, Rillo, Marina C., Yukidoi, Hide, Dong, Yun-Wei, Cronin, Thomas M., Saupe, Erin E. ... Hong, Yuanyuan (2022). Hotspots of cenozoic tropical marine biodiversity. Oceanography and marine biology: an annual review. (pp. 243-300) edited by S. J. Hawkins, A.L. Allcock, A.E. Bates, M. Byrne, A.J. Evans, L.B. Firth, A.J. Lemasson, C. Lucas, E.M. Marzinelli, P.J. Mumby, B.D. Russell, J. Sharples, I.P. Smith, S.E. Swearer and P.A. Todd. Boca Raton, FL, United States: CRC Press. doi: 10.1201/9781003288602-5

Pandolfi, J. M. (2019). Succession. Encyclopedia of Ecology. (pp. 616-623) Amsterdam, Netherlands: Elsevier. doi: 10.1016/B978-0-444-63768-0.00547-3

Pandolfi, J. M. (2018). Succession. Encyclopedia of Ecology. (pp. 616-623) Amsterdam, Netherlands: Elsevier. doi: 10.1016/B978-0-444-63768-0.00547-3

Thurstan, Ruth H., Pandolfi, John M. and zu Ermgassen, Philine S.E. (2017). Animal forests through time: historical data to understand present changes in marine ecosystems. Marine animal forests: the ecology of benthic biodiversity hotspots. (pp. 947-963) Cham, Switzerland: Springer International Publishing. doi: 10.1007/978-3-319-21012-4_31

Thurstan, Ruth H., Pandolfi, John M. and zu Ermgassen, Philine S. E. (2016). Animal forests through time: historical data to understand present changes in marine ecosystems. Marine animal forests. (pp. 1-17) edited by Sergio Rossi, Lorenzo Bramanti, Andrea Gori and Covadonga Orejas Saco del Valle. Cham, Switzerland: Springer International Publishing. doi: 10.1007/978-3-319-17001-5_31-1

Budd, A. F. and Pandolfi, J. M. (2016). Contrasting patterns of speciation in reef corals and their relationship to population connectivity. Species and speciation in the fossil record. (pp. 217-237) edited by Warren D. Allmon and Margaret M. Yacobucci. Chicago: University of Chicago Press.

Thurstan, Ruth H., Buckley, Sarah M. and Pandolfi, John M. (2016). Oral histories: informing natural resource management using perceptions of the past. Perspectives on oceans past: a handbook of marine environmental history. (pp. 155-173) edited by Kathleen Schwerdtner Máñez and Bo Poulsen. Dordrecht , The Netherlands: Springer . doi: 10.1007/978-94-017-7496-3_9

Pandolfi, John M. and Sampayo, Eugenia M. (2015). Adaptation of coral symbiosis to climate change. Mutualism. (pp. 246-248) edited by Judith L. Bronstein. Oxford, United Kingdom: Oxford Univerisity Press.

Ban, Natalie C., Kittinger, John N., Pandolfi, John M., Pressey, Robert L., Thurstan, Ruth H., Lybolt, Matt J. and Hart, Simon (2014). Incorporating historical perspectives into systematic marine conservation planning. Marine historical ecology in conservation. (pp. 207-233) Santa Barbara, CA, United States: University of California Press. doi: 10.1525/california/9780520276949.003.0010

Jackson, Jeremy B. C., Donovan, Mary K., Cramer, Katie L., Lam, Vivian Y. Y., Bak, Rolf P. M., Chollett, Iliana, Connolly, Sean R., Cortés, Jorge, Dustan, Phil, Eakin, C. Mark, Friedlander, Alan M., Greenstein, Benjamin J., Heron, Scott F., Hughes, Terry, Miller, Jeff, Mumby, Peter, Pandolfi, John M., Rogers, Caroline S., Steneck, Robert, Weil, Ernesto, Alemu I, Jahson B., Alevizon, William S., Arias-González, Jesús Ernesto, Atkinson, Andrea, Ballantine, David L., Bastidas, Carolina, Bouchon, Claude, Bouchon-Navaro, Yolande, Box, Steve ... Witman, Jon D. (2014). Part I: Overview and synthesis for the wider Caribbean region. Status and trends of Caribbean coral reefs: 1970-2012. (pp. 55-154) edited by Jeremy Jackson, Mary Donovan, Katie Cramer and Vivian Lam. Washington, DC, United States: Global Coral Reef Monitoring Network.

Pandolfi, John M. (2011). Historical ecology of coral reefs. Encyclopedia of Modern Coral Reefs: Structure, Form and Process. (pp. 554-558) edited by Hopley, D.. Berlin, Germany: Springer-Verlag. doi: 10.1007/978-90-481-2639-2_94

Pandolfi, John. M. (2011). The paleoecology of coral reefs. Coral reefs: An ecosystem in transition. (pp. 13-24) edited by Zvy Dubinsky and Noga Stambler. Dordrecht, Netherlands: Springer. doi: 10.1007/978-94-007-0114-4

Pandolfi, J.M. and Kelley, R. (2008). The Great Barrier Reef in Time and Space: Geology and Palaeobiology. The Great Barrier Reef: Biology, Environment and Management. (pp. 17-27) edited by Hutchings, P.A., Kingsford, M.J. and Hoegh-Guldberg, O.. Collingwood, Victoria: CSIRO Publishing.

Pandolfi, J. M. (2008). Succession. Encyclopedia of Ecology. (pp. 3416-3424) edited by Sven Erik Jørgensen and Brian Fath. Oxford: Elsevier. doi: 10.1016/B978-008045405-4.00547-4

Pandolfi, J. M. (2007). Ancient Reefs. Palaeobiology II. (pp. 307-309) Wiley Blackwell. doi: 10.1002/9780470999295ch.69

Pandolfi, J. M. and Greenstein, B. J. (2007). Using the past to understand the future: palaeoecology of coral reefs. Climate Change and the Great Barrier Reef: A Vulnerability Assessment. (pp. 717-744) edited by Johnson, J. E. and Marshall, P. A.. Townsville, Queensland: Great Barrier Reef Marine Park Authority and The Australian Greenhouse Office.

Pandolfi, J. M. and Jackson, B. C. (2006). Broad-scale Patterns in Pleistocene Coral Reef Communities from the Caribbean: Implications for Ecology and Management. Geological Approaches to Coral Reef Ecology. (pp. 201-236) edited by Richard B. Aronson. New York: Springer Science and Business Media, LLC. doi: 10.1007/978-0-387-33537-7_8

Roy, K. and Pandolfi, J. M. (2005). Responses of Marine Species and Ecosystems to Past Climate Change. Climate Change and Biodiversity. (pp. 160-175) edited by Thomas E. Lovejoy and Lee Hannah. New Haven & London: Yale University Press.

Blake, S. G. and Pandolfi, J. M. (2004). Chapter 12 Geology of selected islands of the Pitcairn group, Southern Polynesia. (pp. 407-431) Elsevier. doi: 10.1016/S0070-4571(04)80034-7

Pandolfi, J. M. (1995). Geomorphology of the Uplifted Pleistocene Atoll At Henderson Island, Pitcairn Group. The Pitcairn Island: biogeography, ecology and prehistory. (pp. 63-77) London, United Kingdom: Academic Press. doi: 10.1111/j.1095-8312.1995.tb01078.x

Cunningham, Emer T., Staples, Timothy L., Butler, Ian R., Lepore, Mauro, Markham Summers, Hannah, Roff, George and Pandolfi, John M. (2024). Taxonomic novelty emerges more frequently and independently of functional novelty in historical coral communities. Oikos. doi: 10.1111/oik.10912

Godbold, Amanda, Clark, Nina, Cunningham, Emer T., Bottjer, David J. and Pandolfi, John M. (2024). Temporal dynamics of Devonian reef communities: Insights into natural phase shifts and long-term resilience in the face of environmental variability. Palaeogeography, Palaeoclimatology, Palaeoecology, 648 112264, 112264. doi: 10.1016/j.palaeo.2024.112264

McLaren, Emily, Sommer, Brigitte, Pandolfi, John M., Beger, Maria and Byrne, Maria (2024). Taxa‐dependent temporal trends in the abundance and size of sea urchins in subtropical eastern Australia. Ecology and Evolution, 14 (5) e11412, e11412. doi: 10.1002/ece3.11412

Grinham, Alistair, Costantini, Tony, Deering, Nathaniel, Jackson, Cameron, Klein, Carissa, Lovelock, Catherine, Pandolfi, John, Eyal, Gal, Linde, Michael, Dunbabin, Matthew, Duncan, Brendon, Hutley, Nicholas, Byrne, Ilha, Wilson, Craig and Albert, Simon (2024). Nitrogen loading resulting from major floods and sediment resuspension to a large coastal embayment. Science of the Total Environment, 918 170646, 170646. doi: 10.1016/j.scitotenv.2024.170646

Sommer, Brigitte, Hodge, Jessica M., Lachs, Liam, Cant, James, Pandolfi, John M. and Beger, Maria (2024). Decadal demographic shifts and size-dependent disturbance responses of corals in a subtropical warming hotspot. Scientific Reports, 14 (1) 6327, 1-13. doi: 10.1038/s41598-024-56890-w

Cai, Chunzhi, Hammerman, Nicholas Matthew, Pandolfi, John M., Duarte, Carlos M. and Agusti, Susana (2024). Influence of global warming and industrialization on coral reefs: A 600-year record of elemental changes in the Eastern Red Sea. Science of The Total Environment, 914 169984, 1-11. doi: 10.1016/j.scitotenv.2024.169984

Chong-Montenegro, Carolina, Thurstan, Ruth H. and Pandolfi, John M. (2024). Diving into archival data: The hidden decline of the giant grouper (Epinephelus lanceolatus) in Queensland, Australia. Aquatic Conservation: Marine and Freshwater Ecosystems, 34 (2) e4094. doi: 10.1002/aqc.4094

Staples, Timothy L. and Pandolfi, John M. (2024). Local compositional change and regional stability across 3000 years of coral reef development. Global Ecology and Biogeography, 33 (2), 244-258. doi: 10.1111/geb.13787

Meziere, Zoe, Popovic, Iva, Prata, Katharine, Ryan, Isobel, Pandolfi, John and Riginos, Cynthia (2024). Exploring coral speciation: Multiple sympatric Stylophora pistillata taxa along a divergence continuum on the Great Barrier Reef. Evolutionary Applications, 17 (1) ARTN e13644, e13644. doi: 10.1111/eva.13644

Sommer, Brigitte, Chang, Yuen Y., Beger, Maria and Pandolfi, John M. (2024). Does high parasite load contribute to limitation of the poleward range of Acropora corals?. Coral Reefs, 43 (4), 1139-1144. doi: 10.1007/s00338-024-02518-4

Chong, Fiona, Sommer, Brigitte, Stant, Georgia, Verano, Nina, Cant, James, Lachs, Liam, Johnson, Magnus L., Parsons, Daniel R., Pandolfi, John M., Salguero‐Gómez, Roberto, Spencer, Matthew and Beger, Maria (2023). High‐latitude marginal reefs support fewer but bigger corals than their tropical counterparts. Ecography, 2023 (12) e06835, 1-14. doi: 10.1111/ecog.06835

Cant, James, Reimer, James D., Sommer, Brigitte, Cook, Katie M., Kim, Sun W., Sims, Carrie A., Mezaki, Takuma, O'Flaherty, Cliodhna, Brooks, Maxime, Malcolm, Hamish A., Pandolfi, John M., Salguero‐Gómez, Roberto and Beger, Maria (2023). Coral assemblages at higher latitudes favor short‐term potential over long‐term performance. Ecology, 104 (9) e4138, 1-16. doi: 10.1002/ecy.4138

Clark, Tara R., Roff, George, Chapman, Tess, Markham-Summers, Hannah, Hammerman, Nicholas M., Liu, Faye, Feng, Yuexing, Pandolfi, John M. and Zhao, Jian-xin (2023). Reconstructing past disturbance in coral communities using U-Th dating of dead coral skeletons. Geology, 51 (10), 983-987. doi: 10.1130/g51419.1

Kim, Sun W., Sommer, Brigitte, Beger, Maria and Pandolfi, John M. (2023). Regional and global climate risks for reef corals: Incorporating species‐specific vulnerability and exposure to climate hazards. Global Change Biology, 29 (14), 4140-4151. doi: 10.1111/gcb.16739

Raja, Nussaïbah B., Pandolfi, John M. and Kiessling, Wolfgang (2023). Modularity explains large-scale reef booms in Earth’s history. Facies, 69 (3) 15, 1-12. doi: 10.1007/s10347-023-00671-w

Cumming, Graeme S., Adamska, Maja, Barnes, Michele L., Barnett, Jon, Bellwood, David R., Cinner, Joshua E., Cohen, Philippa J., Donelson, Jennifer M., Fabricius, Katharina, Grafton, R. Quentin, Grech, Alana, Gurney, Georgina G., Hoegh-Guldberg, Ove, Hoey, Andrew S., Hoogenboom, Mia O., Lau, Jacqueline, Lovelock, Catherine E., Lowe, Ryan, Miller, David J., Morrison, Tiffany H., Mumby, Peter J., Nakata, Martin, Pandolfi, John M., Peterson, Garry D., Pratchett, Morgan S., Ravasi, Timothy, Riginos, Cynthia, Rummer, Jodie L., Schaffelke, Britta ... Wilson, Shaun K. (2023). Research priorities for the sustainability of coral-rich western Pacific seascapes. Regional Environmental Change, 23 (2) 66, 66. doi: 10.1007/s10113-023-02051-0

Miller, Mark G. R., Reimer, James D., Sommer, Brigitte, Cook, Katie M., Pandolfi, John M., Obuchi, Masami and Beger, Maria (2023). Temperate functional niche availability not resident-invader competition shapes tropicalisation in reef fishes. Nature Communications, 14 (1) 2181, 1-12. doi: 10.1038/s41467-023-37550-5

Gutierrez‐Isaza, Nataly, Sampayo, Eugenia M., Lovelock, Catherine E., Dalton, Steven J., Sims, Carrie A., Ward, Selina and Pandolfi, John M. (2023). Latitudinal patterns of egg size and maternal investment trade‐offs in reef corals. Global Ecology and Biogeography, 32 (3), 421-434. doi: 10.1111/geb.13631

Sims, C.A., Sampayo, E.M., Kim, S.W., Mayfield, M.M. and Pandolfi, J.M. (2023). Coral early life history dynamics: conspecific facilitation or limitation are dependent on distinct life stage interactions. Marine Ecology Progress Series, 720, 39-57. doi: 10.3354/meps14400

Bridge, Tom C. L., Baird, Andrew H., Pandolfi, John M., McWilliam, Michael J. and Zapalski, Mikołaj K. (2022). Author Correction: Functional consequences of Palaeozoic reef collapse (Scientific Reports, (2022), 12, 1, (1386), 10.1038/s41598-022-05154-6). Scientific Reports, 12 (1) 4429, 4429. doi: 10.1038/s41598-022-08420-9

Eyal, Gal, Laverick, Jack H., Ben-Zvi, Or, Brown, Kristen T., Kramer, Netanel, Tamir, Raz, Lindemann, Yoav, Levy, Oren and Pandolfi, John M. (2022). Selective deep water coral bleaching occurs through depth isolation. Science of the Total Environment, 844 157180, 157180. doi: 10.1016/j.scitotenv.2022.157180

Chong-Montenegro, Carolina, Thurstan, Ruth H. and Pandolfi, John M. (2022). Quantifying the historical development of recreational fisheries in Southeast Queensland, Australia. Marine Ecology Progress Series, 696, 135-149. doi: 10.3354/meps14138

Hammerman, Nicholas M., Roff, George, Lybolt, Tracy, Eyal, Gal and Pandolfi, John M. (2022). Unraveling Moreton Bay reef history: an urban high-latitude setting for coral development. Frontiers in Ecology and Evolution, 10 884850, 1-15. doi: 10.3389/fevo.2022.884850

Staples, Timothy L., Kiessling, Wolfgang and Pandolfi, John M. (2022). Emergence patterns of locally novel plant communities driven by past climate change and modern anthropogenic impacts. Ecology Letters, 25 (6), 1497-1509. doi: 10.1111/ele.14016

Bridge, Tom C. L., Baird, Andrew H., Pandolfi, John M., McWilliam, Michael J. and Zapalski, Mikołaj K. (2022). Functional consequences of Palaeozoic reef collapse. Scientific Reports, 12 (1) 1386, 1386. doi: 10.1038/s41598-022-05154-6

Hammerman, Nicholas M., Rodriguez-Ramirez, Alberto, Staples, Timothy L., DeCarlo, Thomas M., Saderne, Vincent, Roff, George, Leonard, Nicole, Zhao, Jian-xin, Rossbach, Susann, Havlik, Michelle N., Duarte, Carlos M. and Pandolfi, John M. (2021). Variable response of Red Sea coral communities to recent disturbance events along a latitudinal gradient. Marine Biology, 168 (12) 177. doi: 10.1007/s00227-021-03984-y

Chong‐Montenegro, Carolina, Thurstan, Ruth H., Campbell, Alexander B., Cunningham, Emer T. and Pandolfi, John M. (2021). Historical reconstruction and social context of recreational fisheries: the Australian East Coast Barramundi. Fisheries Management and Ecology, 29 (1), 44-56. doi: 10.1111/fme.12519

Hammerman, Nicholas M., Roff, George, Rodriguez-Ramirez, Alberto, Leonard, Nicole, Staples, Timothy L., Eyal, Gal, Rossbach, Susann, Havlik, Michelle N., Saderne, Vincent, Zhao, Jian-xin, Duarte, Carlos M. and Pandolfi, John M. (2021). Reef accumulation is decoupled from recent degradation in the central and southern Red Sea. Science of the Total Environment, 809 151176, 1. doi: 10.1016/j.scitotenv.2021.151176

Ziegler, Maren, Anton, Andrea, Klein, Shannon G., Rädecker, Nils, Geraldi, Nathan R., Schmidt‐Roach, Sebastian, Saderne, Vincent, Mumby, Peter J., Cziesielski, Maha J., Martin, Cecilia, Frölicher, Thomas L., Pandolfi, John M., Suggett, David J., Aranda, Manuel, Duarte, Carlos M. and Voolstra, Christian R. (2021). Integrating environmental variability to broaden the research on coral responses to future ocean conditions. Global Change Biology, 27 (21) gcb.15840, 5532-5546. doi: 10.1111/gcb.15840

Klein, Shannon G., Geraldi, Nathan R., Anton, Andrea, Schmidt‐Roach, Sebastian, Ziegler, Maren, Cziesielski, Maha J., Martin, Cecilia, Rädecker, Nils, Frölicher, Thomas L., Mumby, Peter J., Pandolfi, John M., Suggett, David J., Voolstra, Christian R., Aranda, Manuel and Duarte, Carlos. M. (2021). Projecting coral responses to intensifying marine heatwaves under ocean acidification. Global Change Biology, 28 (5) gcb.15818, 1-13. doi: 10.1111/gcb.15818

Sims, Carrie A., Sampayo, Eugenia M., Mayfield, Margaret M., Staples, Timothy L., Dalton, Steven J., Gutierrez‐Isaza, Nataly and Pandolfi, John M. (2021). Janzen–Connell effects partially supported in reef‐building corals: adult presence interacts with settler density to limit establishment. Oikos, 130 (8) oik.08110, 1310-1325. doi: 10.1111/oik.08110

Lachs, Liam, Sommer, Brigitte, Cant, James, Hodge, Jessica M., Malcolm, Hamish A., Pandolfi, John M. and Beger, Maria (2021). Linking population size structure, heat stress and bleaching responses in a subtropical endemic coral. Coral Reefs, 40 (3), 777-790. doi: 10.1007/s00338-021-02081-2

Raja, Nussaïbah B., Lauchstedt, Andreas, Pandolfi, John M., Kim, Sun W., Budd, Ann F. and Kiessling, Wolfgang (2021). Morphological traits of reef corals predict extinction risk but not conservation status. Global Ecology and Biogeography, 30 (8) geb.13321, 1-12. doi: 10.1111/geb.13321

Sommer, B., Butler, I. R. and Pandolfi, J. M. (2021). Trait-based approach reveals how marginal reefs respond to acute and chronic disturbance. Coral Reefs, 40 (3), 735-749. doi: 10.1007/s00338-021-02077-y

Bennett, Scott, Santana‐Garcon, Julia, Marbà, Núria, Jorda, Gabriel, Anton, Andrea, Apostolaki, Eugenia T., Cebrian, Just, Geraldi, Nathan R., Krause‐Jensen, Dorte, Lovelock, Catherine E., Martinetto, Paulina, Pandolfi, John M. and Duarte, Carlos M. (2021). Climate‐driven impacts of exotic species on marine ecosystems. Global Ecology and Biogeography, 30 (5) geb.13283, 1043-1055. doi: 10.1111/geb.13283

Eyal, Gal, Laverick, Jack H., Bongaerts, Pim, Levy, Oren and Pandolfi, John M. (2021). Mesophotic Coral Ecosystems of the Great Barrier Reef Are Understudied and Underexplored. Frontiers in Marine Science, 8 622856. doi: 10.3389/fmars.2021.622856

Cramer, Katie L., Donovan, Mary K., Jackson, Jeremy B. C., Greenstein, Benjamin J., Korpanty, Chelsea A., Cook, Geoffrey M. and Pandolfi, John M. (2021). The transformation of Caribbean coral communities since humans. Ecology and Evolution, 11 (15), 10098-10118. doi: 10.1002/ece3.7808

Hua, Quan, Ulm, Sean, Yu, Kefu, Clark, Tara R., Nothdurft, Luke D., Leonard, Nicole D., Pandolfi, John M., Jacobsen, Geraldine E. and Zhao, Jian-xin (2020). Temporal variability in the Holocene marine radiocarbon reservoir effect for the Tropical and South Pacific. Quaternary Science Reviews, 249 106613, 106613. doi: 10.1016/j.quascirev.2020.106613

Cant, James, Salguero‐Gómez, Roberto, Kim, Sun W., Sims, Carrie A., Sommer, Brigitte, Brooks, Maxime, Malcolm, Hamish A., Pandolfi, John M. and Beger, Maria (2020). The projected degradation of subtropical coral assemblages by recurrent thermal stress. Journal of Animal Ecology, 90 (1) 1365-2656.13340, 233-247. doi: 10.1111/1365-2656.13340

Pandolfi, John M., Staples, Timothy L. and Kiessling, Wolfgang (2020). Increased extinction in the emergence of novel ecological communities. Science, 370 (6513), 220-222. doi: 10.1126/science.abb3996

Leonard, Nicole D., Lepore, Mauro L., Zhao, Jian-xin, Rodriguez-Ramirez, Alberto, Butler, Ian R., Clark, Tara R., Roff, George, McCook, Laurence, Nguyen, Ai D., Feng, Yuexing and Pandolfi, John M. (2020). Re-evaluating mid-Holocene reef “turn-off” on the inshore Southern Great Barrier Reef. Quaternary Science Reviews, 244 106518, 106518. doi: 10.1016/j.quascirev.2020.106518

DeCarlo, Thomas M., Gajdzik, Laura, Ellis, Joanne, Coker, Darren J., Roberts, May B., Hammerman, Nicholas M., Pandolfi, John M., Monroe, Alison A. and Berumen, Michael L. (2020). Nutrient-supplying ocean currents modulate coral bleaching susceptibility. Science Advances, 6 (34) eabc5493, eabc5493. doi: 10.1126/sciadv.abc5493

Lovelock, Catherine E., Reef, Ruth, Raven, John A. and Pandolfi, John M. (2020). Regional variation in δ13 C of coral reef macroalgae. Limnology and Oceanography, 65 (10) lno.11453, 2291-2302. doi: 10.1002/lno.11453

Cramer, Katie L., Jackson, Jeremy B. C., Donovan, Mary K., Greenstein, Benjamin J., Korpanty, Chelsea A., Cook, Geoffrey M. and Pandolfi, John M. (2020). Widespread loss of Caribbean acroporid corals was underway before coral bleaching and disease outbreaks. Science Advances, 6 (17) eaax9395, eaax9395. doi: 10.1126/sciadv.aax9395

O’Dea, Aaron, Lepore, Mauro, Altieri, Andrew H., Chan, Melisa, Morales-Saldaña, Jorge Manuel, Muñoz, Nicte-Ha, Pandolfi, John M., Toscano, Marguerite A., Zhao, Jian-xin and Dillon, Erin M. (2020). Defining variation in pre-human ecosystems can guide conservation: an example from a Caribbean coral reef. Scientific Reports, 10 (1) 2922, 2922. doi: 10.1038/s41598-020-59436-y

Geraldi, Nathan R., Anton, Andrea, Santana-Garcon, Julia, Bennett, Scott, Marba, Nuria, Lovelock, Catherine E., Apostolaki, Eugenia T., Cebrian, Just, Krause-Jensen, Dorte, Martinetto, Paulina, Pandolfi, John M. and Duarte, Carlos M. (2020). Ecological effects of non-native species in marine ecosystems relate to co-occurring anthropogenic pressures. Global Change Biology, 26 (3) gcb.14930, 1248-1258. doi: 10.1111/gcb.14930

Anton, Andrea, Geraldi, Nathan R., Lovelock, Catherine E., Apostolaki, Eugenia T., Bennett, Scott, Cebrian, Just, Krause-Jensen, Dorte, Marbà, Nuria, Martinetto, Paulina, Pandolfi, John M., Santana-Garcon, Julia and Duarte, Carlos M. (2020). Reply to: Indiscriminate data aggregation in ecological meta-analysis underestimates impacts of invasive species. Nature Ecology and Evolution, 4 (3), 315-317. doi: 10.1038/s41559-020-1118-5

Sampayo, E. M., Roff, G., Sims, C. A., Rachello-Dolmen, P. G. and Pandolfi, J. M. (2020). Patch size drives settlement success and spatial distribution of coral larvae under space limitation. Coral Reefs, 39 (2), 387-396. doi: 10.1007/s00338-020-01901-1

Leonard, Nicole D., Lepore, Mauro L., Zhao, Jian-xin, Rodriguez-Ramirez, Alberto, Butler, Ian, Clark, Tara R., Roff, George, McCook, Laurence, Nguyen, Ai D., Feng, Yuexing and Pandolfi, John M. (2020). A U-Th dating approach to understanding past coral reef dynamics and geomorphological constraints on future reef growth potential; Mazie Bay, Southern Great Barrier Reef. Paleoceanography and Paleoclimatology, 35 (2) e2019PA003768. doi: 10.1029/2019PA003768

Blanckaert, Alice C. A., Reef, Ruth, Pandolfi, John M. and Lovelock, Catherine E. (2020). Variation in the elemental stoichiometry of the coral–zooxanthellae symbiosis. Coral Reefs, 39 (4), 1071-1079. doi: 10.1007/s00338-020-01932-8

Leonard, N. D., Welsh, K. J., Nguyen, A. D., Sadler, J., Pandolfi, J. M., Clark, T. R., Zhao, J. X., Feng, Y. X. and Webb, G. E. (2019). High resolution geochemical analysis of massive Porites spp. corals from the Wet Tropics, Great Barrier Reef: rare earth elements, yttrium and barium as indicators of terrigenous input. Marine Pollution Bulletin, 149 110634, 110634. doi: 10.1016/j.marpolbul.2019.110634

Fraser, Kerrie A., Adams, Vanessa M., Pressey, Robert L. and Pandolfi, John M. (2019). Impact evaluation and conservation outcomes in marine protected areas: a case study of the Great Barrier Reef Marine Park. Biological Conservation, 238 108185, 108185. doi: 10.1016/j.biocon.2019.07.030

Kim, Sun W., Sampayo, Eugenia M., Sommer, Brigitte, Sims, Carrie A., Gómez‐Cabrera, Maria del C., Dalton, Steve J., Beger, Maria, Malcolm, Hamish A., Ferrari, Renata, Fraser, Nicola, Figueira, Will F., Smith, Stephen D. A., Heron, Scott F., Baird, Andrew H., Byrne, Maria, Eakin, C. Mark, Edgar, Robert, Hughes, Terry P., Kyriacou, Nicole, Liu, Gang, Matis, Paloma A., Skirving, William J. and Pandolfi, John M. (2019). Refugia under threat: mass bleaching of coral assemblages in high‐latitude eastern Australia. Global Change Biology, 25 (11) gcb.14772, 3918-3931. doi: 10.1111/gcb.14772

Darling, Emily S., McClanahan, Tim R., Maina, Joseph, Gurney, Georgina G., Graham, Nicholas A. J., Januchowski-Hartley, Fraser, Cinner, Joshua E., Mora, Camilo, Hicks, Christina C., Maire, Eva, Puotinen, Marji, Skirving, William J., Adjeroud, Mehdi, Ahmadia, Gabby, Arthur, Rohan, Bauman, Andrew G., Beger, Maria, Berumen, Michael L., Bigot, Lionel, Bouwmeester, Jessica, Brenier, Ambroise, Bridge, Tom C. L., Brown, Eric, Campbell, Stuart J., Cannon, Sara, Cauvin, Bruce, Chen, Chaolun Allen, Claudet, Joachim, Denis, Vianney ... Mouillot, David (2019). Social–environmental drivers inform strategic management of coral reefs in the Anthropocene. Nature Ecology and Evolution, 3 (9), 1341-1350. doi: 10.1038/s41559-019-0953-8

Anton, Andrea, Geraldi, Nathan R., Lovelock, Catherine E., Apostolaki, Eugenia T., Bennett, Scott, Cebrian, Just, Krause-Jensen, Dorte, Marbà, Nuria, Martinetto, Paulina, Pandolfi, John M., Santana-Garcon, Julia and Duarte, Carlos M. (2019). Publisher correction: Global ecological impacts of marine exotic species. Nature Ecology and Evolution, 3 (9), 1367-1367. doi: 10.1038/s41559-019-0965-4

Gomez Cabrera, Maria, Young, Jennifer M., Roff, George, Staples, Timothy, Ortiz, Juan Carlos, Pandolfi, John M. and Cooper, Alan (2019). Broadening the taxonomic scope of coral reef palaeoecological studies using ancient DNA. Molecular Ecology, 28 (10) mec.15038, 2636-2652. doi: 10.1111/mec.15038

Anton, Andrea, Geraldi, Nathan R., Lovelock, Catherine E., Apostolaki, Eugenia T., Bennett, Scott, Cebrian, Just, Krause-Jensen, Dorte, Marbà, Nuria, Martinetto, Paulina, Pandolfi, John M., Santana-Garcon, Julia and Duarte, Carlos M. (2019). Global ecological impacts of marine exotic species. Nature Ecology and Evolution, 3 (5), 787-800. doi: 10.1038/s41559-019-0851-0

Crandall, Eric D., Riginos, Cynthia, Bird, Chris E., Liggins, Libby, Treml, Eric, Beger, Maria, Barber, Paul H., Connolly, Sean R., Cowman, Peter F., DiBattista, Joseph D., Eble, Jeff A., Magnuson, Sharon F., Horne, John B., Kochzius, Marc, Lessios, Harilaos A., Liu, Shang Yin Vanson, Ludt, William B., Madduppa, Hawis, Pandolfi, John M., Toonen, Robert J., Gaither, Michelle R. and , (2019). The molecular biogeography of the Indo‐Pacific: testing hypotheses with multispecies genetic patterns. Global Ecology and Biogeography, 28 (7) geb.12905, 943-960. doi: 10.1111/geb.12905

Donelson, Jennifer M., Sunday, Jennifer M., Figueira, Will F., Gaitán-Espitia, Juan Diego, Hobday, Alistair J., Johnson, Craig R., Leis, Jeffrey M., Ling, Scott D., Marshall, Dustin, Pandolfi, John M., Pecl, Gretta, Rodgers, Giverny G., Booth, David J. and Munday, Philip L. (2019). Understanding interactions between plasticity, adaptation and range shifts in response to marine environmental change. Philosophical Transactions of the Royal Society B: Biological Sciences, 374 (1768) Y, 20180186. doi: 10.1098/rstb.2018.0186

Buckley, Sarah M., McClanahan, Tim R., Quintana Morales, Eréndira M., Mwakha, Victor, Nyanapah, Jatieno, Otwoma, Levy M. and Pandolfi, John M. (2019). Identifying species threatened with local extinction in tropical reef fisheries using historical reconstruction of species occurrence. PLoS ONE, 14 (2) e0211224, e0211224. doi: 10.1371/journal.pone.0211224

Bellwood, David R., Pratchett, Morgan S., Morrison, Tiffany H., Gurney, Georgina G., Hughes, Terry P., Álvarez-Romero, Jorge G., Day, Jon C., Grantham, Ruby, Grech, Alana, Hoey, Andrew S., Jones, Geoffrey P., Pandolfi, John M., Tebbett, Sterling B., Techera, Erika, Weeks, Rebecca and Cumming, Graeme S. (2019). Coral reef conservation in the Anthropocene: Confronting spatial mismatches and prioritizing functions. Biological Conservation, 236, 604-615. doi: 10.1016/j.biocon.2019.05.056

Thurstan, Ruth H., Buckley, Sarah M. and Pandolfi, John M. (2018). Trends and transitions observed in an iconic recreational fishery across 140 years. Global Environmental Change, 52, 22-36. doi: 10.1016/j.gloenvcha.2018.06.002

Kim, Sun W., Blomberg, Simon P. and Pandolfi, John M. (2018). Transcending data gaps: a framework to reduce inferential errors in ecological analyses. Ecology Letters, 21 (8), 1200-1210. doi: 10.1111/ele.13089

Brito-Morales, Isaac, García Molinos, Jorge, Schoeman, David S., Burrows, Michael T., Poloczanska, Elvira S., Brown, Christopher J., Ferrier, Simon, Harwood, Tom D., Klein, Carissa J., McDonald-Madden, Eve, Moore, Pippa J., Pandolfi, John M., Watson, James E. M., Wenger, Amelia S. and Richardson, Anthony J. (2018). Climate velocity can inform conservation in a warming world. Trends in Ecology and Evolution, 33 (6), 441-457. doi: 10.1016/j.tree.2018.03.009

Leonard, N. D., Welsh, K. J., Clark, T. R., Feng, Y. X., Pandolfi, J. M. and Zhao, J. X. (2018). New evidence for “far-field” Holocene sea level oscillations and links to global climate records. Earth and Planetary Science Letters, 487, 67-73. doi: 10.1016/j.epsl.2018.02.008

Carilli, Jessica E., Hartmann, Aaron C., Heron, Scott F., Pandolfi, John M., Cobb, Kim, Sayani, Hussein, Dunbar, Robert and Sandin, Stuart A. (2017). Porites coral response to an oceanographic and human impact gradient in the Line Islands. Limnology and Oceanography, 62 (6), 2850-2863. doi: 10.1002/lno.10670

Clark, Tara R., Roff, George, Zhao, Jian-xin, Feng, Yue-xing, Done, Terence J., McCook, Laurence J. and Pandolfi, John M. (2017). U-Th dating reveals regional-scale decline of branching Acropora corals on the Great Barrier Reef over the past century. Proceedings of the National Academy of Sciences of the United States of America, 114 (39), 10350-10355. doi: 10.1073/pnas.1705351114

McClenachan, Loren, O'Connor, Grace, Neal, Benjamin P., Pandolfi, John M. and Jackson, Jeremy B. C. (2017). Ghost reefs: Nautical charts document large spatial scale of coral reef loss over 240 years. Science Advances, 3 (9) 1603155, e1603155. doi: 10.1126/sciadv.1603155

Lauchstedt, Andreas, Pandolfi, John M. and Kiessling, Wolfgang (2017). Towards a new paleotemperature proxy from reef coral occurrences. Scientific Reports, 7 (1) 10461, 10461. doi: 10.1038/s41598-017-10961-3

Sommer, Brigitte, Sampayo, Eugenia M., Beger, Maria, Harrison, Peter L., Babcock, Russ and Pandolfi, John M. (2017). Local and regional controls of phylogenetic structure at the high-latitude range limits of corals. Proceedings of the Royal Society B - Biological Sciences, 284 (1861) 20170915, 20170915. doi: 10.1098/rspb.2017.0915

Buckley, Sarah M., Thurstan, Ruth H., Tobin, Andrew and Pandolfi, John M. (2017). Historical spatial reconstruction of a spawning-aggregation fishery. Conservation biology: the journal of the Society for Conservation Biology, 31 (6), 1322-1332. doi: 10.1111/cobi.12940

Thurstan, Ruth H., Game, Edward and Pandolfi, John M. (2017). Popular media records reveal multi-decadal trends in recreational fishing catch rates. PLoS One, 12 (8) e0182345, e0182345. doi: 10.1371/journal.pone.0182345

Madden, Robert H. C., Wilson, Moyra E. J., Mihaljević, Morana, Pandolfi, John M. and Welsh, Kevin (2017). Unravelling the depositional origins and diagenetic alteration of carbonate breccias. Sedimentary Geology, 357, 33-52. doi: 10.1016/j.sedgeo.2017.05.002

Fraser, Kerrie A., Adams, Vanessa M., Pressey, Robert L. and Pandolfi, John M. (2017). Purpose, policy, and practice: intent and reality for on-ground management and outcomes of the Great Barrier Reef Marine Park. Marine Policy, 81, 301-311. doi: 10.1016/j.marpol.2017.03.039

Sommer, Brigitte, Beger, Maria, Harrison, Peter L. , Babcock, Russ C. and Pandolfi, John M. (2017). Differential response to abiotic stress controls species distributions at biogeographic transition zones. Ecography, 41 (3), 478-490. doi: 10.1111/ecog.02986

Mihaljevic, Morana , Korpanty, Chelsea , Renema, Willem , Welsh, Kevin and Pandolfi, John M. (2017). Identifying patterns and drivers of coral diversity in the Central Indo-Pacific marine biodiversity hotspot. Paleobiology, 43 (3), 343-364. doi: 10.1017/pab.2017.1

Prazeres, Martina, Roberts, T. Edward and Pandolfi, John M. (2017). Variation in sensitivity of large benthic Foraminifera to the combined effects of ocean warming and local impacts. Scientific Reports, 7 (45227) 45227, 45227. doi: 10.1038/srep45227

Prazeres, Martina, Ainsworth, Tracy, Roberts, T. Edward, Pandolfi, John M. and Leggat, William (2017). Symbiosis and microbiome flexibility in calcifying benthic foraminifera of the Great Barrier Reef. Microbiome, 5 (38) 38, 38. doi: 10.1186/s40168-017-0257-7

Prada, Carlos, Hanna, Bishoy, Budd, Ann F., Woodley, Cheryl M., Schmutz, Jeremy, Grimwood, Jane, Iglesias-Prieto, Roberto, Pandolfi, John M., Levitan, Don, Johnson, Kenneth G., Knowlton, Nancy, Kitano, Hiroaki, DeGiorgio, Michae and Medina, Monica (2016). Empty niches after extinctions increase population sizes of modern corals. Current Biology, 26 (23), 3190-3194. doi: 10.1016/j.cub.2016.09.039

Scheffers, Brett R., De Meester, Luc, Bridge, Tom C. L., Hoffmann, Ary A., Pandolfi, John M., Corlett, Richard T., Butchart, Stuart H. M., Pearce-Kelly, Paul, Kovacs, Kit M., Dudgeon, David, Pacifici, Michela, Rondinini, Carlo, Foden, Wendy B., Martin, Tara G., Mora, Camilo, Bickford, David and Watson, James E. M. (2016). The broad footprint of climate change from genes to biomes to people. Science, 354 (6313) aaf7671, 719-+. doi: 10.1126/science.aaf7671

Prazeres, Martina, Roberts, T. Edward and Pandolfi, John M. (2016). Shifts in species abundance of large benthic foraminifera Amphistegina: the possible effects of tropical cyclone Ita. Coral Reefs, 36 (1), 1-5. doi: 10.1007/s00338-016-1497-x

Leonard, N. D., Welsh, K. J., Lough, J. M., Feng, Y., Pandolfi, J. M., Clark, T. R. and Zhao, J. (2016). Evidence of reduced mid-Holocene ENSO variance on the Great Barrier Reef, Australia. Paleoceanography, 31 (9), 1248-1260. doi: 10.1002/2016PA002967

Prazeres, Martina and Pandolfi, John M. (2016). Effects of elevated temperature on the shell density of the large benthic foraminifera Amphistegina lobifera. Journal of Eukaryotic Microbiology, 63 (6), 786-793. doi: 10.1111/jeu.12325

Madin, Joshua S., Hoogenboom, Mia O., Connolly, Sean R., Darling, Emily S., Falster, Daniel S., Huang, Danwei, Keith, Sally A., Mizerek, Toni, Pandolfi, John M., Putnam, Hollie M. and Baird, Andrew H. (2016). A trait-based approach to advance coral reef science. Trends in Ecology and Evolution, 31 (6), 419-428. doi: 10.1016/j.tree.2016.02.012

Prazeres, Martina, Uthicke, Sven and Pandolfi, John M. (2016). Changing light levels induce photo-oxidative stress and alterations in shell density of Amphistegina lobifera (Foraminifera). Marine Ecology Progress Series, 549, 69-78. doi: 10.3354/meps11698

Renema, Willem, Pandolfi, John M., Kiessling, Wolfgang, Bosellini, Francesca R., Klaus, James S., Korpanty, Chelsea, Rosen, Brian R., Santodomingo, Nadiezhda, Wallace, Carden C., Webster, Jody M. and Johnson, Kenneth G. (2016). Are coral reefs victims of their own past success?. Science Advances, 2 (4) e1500850, e1500850. doi: 10.1126/sciadv.1500850

Brown, Christopher J., O'Connor, Mary I., Poloczanska, Elvira S., Schoeman, David S., Buckley, Lauren B., Burrows, Michael T., Duarte, Carlos M., Halpern, Benjamin S., Pandolfi, John M., Parmesan, Camille and Richardson, Anthony J. (2016). Ecological and methodological drivers of species' distribution and phenology responses to climate change. Global Change Biology, 22 (4), 1548-1560. doi: 10.1111/gcb.13184

Prazeres, Martina, Uthicke, Sven and Pandolfi, John M. (2016). Influence of local habitat on the physiological responses of large benthic foraminifera to temperature and nutrient stress. Scientific Reports, 6 (Art No.: 21936) 21936, 21936. doi: 10.1038/srep21936

Clark, Tara R., Leonard, Nicole D., Zhao, Jian-xin, Brodie, Jon, McCook, Laurence J., Wachenfeld, David R., Nguyen, Ai Duc, Markham, Hannah L. and Pandolfi, John M. (2016). Historical photographs revisited: a case study for dating and characterizing recent loss of coral cover on the inshore Great Barrier Reef. Scientific Reports, 6 (1) 19285, 19285.1-19285.14. doi: 10.1038/srep19285

Madin, Joshua S., Allen, Andrew P., Baird, Andrew H., Pandolfi, John M. and Sommer, Brigitte (2016). Scope for latitudinal extension of reef corals is species specific. Frontiers of Biogeography, 8 (1) e29328, e29328.1-e29328.4. doi: 10.21425/f58129328

Garcia Molinos, Jorge, Halpern, Benjamin S., Schoeman, David S., Brown, Christopher J., Kiessling, Wolfgang, Moore, Pippa J., Pandolfi, John M., Poloczanska, Elvira S., Richardson, Anthony J. and Burrows, Michael T. (2016). Climate velocity and the future global redistribution of marine biodiversity. Nature Climate Change, 6 (1), 83-88. doi: 10.1038/nclimate2769

Leonard, Nicole D., Zhao, J.-X., Welsh, K.J., Feng, Y.-X., Smithers, S.G., Pandolfi, J.M. and Clark, T.R. (2015). Holocene sea level instability in the southern Great Barrier Reef, Australia: high-precision U–Th dating of fossil microatolls. Coral Reefs, 35 (2), 1-15. doi: 10.1007/s00338-015-1384-x

Pandolfi, John M. (2015). Incorporating uncertainty in predicting the future response of coral reefs to climate change. Annual Review of Ecology, Evolution, and Systematics, 46, 281-303. doi: 10.1146/annurev-ecolsys-120213-091811

Thurstan, R. H., McClenachan, L., Crowder, L. B., Drew, J. A., Kittinger, J. N., Levin, P. S., Roberts, C.,M. and Pandolfi, J. M. (2015). Filling historical data gaps to foster solutions in marine conservation. Ocean and Coastal Management, 115, 31-40. doi: 10.1016/j.ocecoaman.2015.04.019

Duarte, Carlos M., Fulweiler, Robinson W., Lovelock, Catherine E., Pandolfi, John M., Martinetto, Paulina, Saunders, Megan I. and Gelcich, Stefan (2015). 10.1093/biosci/biv088. Bioscience, 65 (8), 746-747. doi: 10.1093/biosci/biv088

Dean, Angela J., Steneck, Robert S., Tager, Danika and Pandolfi, John M. (2015). Distribution, abundance and diversity of crustose coralline algae on the Great Barrier Reef. Coral Reefs, 34 (2), 581-594. doi: 10.1007/s00338-015-1263-5

Finnegan, Seth, Anderson, Sean C., Harnik, Paul G., Simpson, Carl, Tittensor, Derek P., Byrnes, Jarrett E., Finkel, Zoe V., Lindberg, David R., Liow, Lee Hsiang, Lockwood, Rowan, Lotze, Heike K., McClain, Craig R., McGuire, Jenny L., O'Dea, Aaron and Pandolfi, John M. (2015). Paleontological baselines for evaluating extinction risk in the modern oceans. Science, 348 (6234), 567-570. doi: 10.1126/science.aaa6635

Roff, George, Zhao, Jian-xin and Pandolfi, John M. (2015). Rapid accretion of inshore reef slopes from the central Great Barrier Reef during the late Holocene. Geology, 43 (4), 343-346. doi: 10.1130/G36478.1

Butler, I. R., Sommer, B., Zann, M., Zhao, J. -X. and Pandolfi, J. M. (2015). The cumulative impacts of repeated heavy rainfall, flooding and altered water quality on the high-latitude coral reefs of Hervey Bay, Queensland, Australia. Marine Pollution Bulletin, 96 (1-2), 356-367. doi: 10.1016/j.marpolbul.2015.04.047

Winkler, Natalia S., Pandolfi, John M. and Sampayo, Eugenia M. (2015). Symbiodinium identity alters the temperature-dependent settlement behaviour of Acropora millepora coral larvae before the onset of symbiosis. Royal Society of London Proceedings B: Biological Sciences, 282 (1801) 20142260, 1-10. doi: 10.1098/rspb.2014.2260

Prazeres, Martina, Uthicke, Sven and Pandolfi, John M. (2015). Ocean acidification induces biochemical and morphological changes in the calcification process of large benthic foraminifera. Proceedings of the Royal Society B: Biological Sciences, 282 (1803) 20142782, 1-10. doi: 10.1098/rspb.2014.2782

Narayan, Y.Roshni, Lybolt, Matt, Zhao, Jian-xin, Feng, Yuexing and Pandolfi, John M. (2015). Holocene benthic foraminiferal assemblages indicate long-term marginality of reef habitats from Moreton Bay, Australia. Palaeogeography, Palaeoclimatology, Palaeoecology, 420, 49-64. doi: 10.1016/j.palaeo.2014.12.010

Pandolfi, John M. (2015). Ecology: deep and complex ways to survive bleaching. Nature, 518 (7537), 43-44. doi: 10.1038/nature14196

Duarte, Carlos M., Fulweiler, Robinson W., Lovelock, Catherine E., Martinetto, Paulina, Saunders, Megan I., Pandolfi, John M., Gelcich, Stefan and Nixon, Scott W. (2015). Reconsidering ocean calamities. BioScience, 65 (2), 130-139. doi: 10.1093/biosci/biu198

Thurstan, Ruth H., Buckley, Sarah M., Ortiz, Juan C. and Pandolfi, John M. (2015). Setting the record straight: assessing the reliability of retrospective accounts of change. Conservation Letters, 9 (2), 98-105. doi: 10.1111/conl.12184

O'Connor, Mary I., Holding, Johnna M., Kappel, Carrie V., Duarte, Carlos M., Brander, Keith, Brown, Christopher J., Bruno, John F., Buckley, Lauren, Burrows, Michael T., Halpern, Benjamin S., Kiessling, Wolfgang, Moore, Pippa, Pandolfi, John M., Parmesan, Camille, Poloczanska, Elvira S., Schoeman, David S., Sydeman, William J. and Richardson, Anthony J. (2015). Strengthening confidence in climate change impact science. Global Ecology and Biogeography, 24 (1), 64-76. doi: 10.1111/geb.12218

Orzechowski, Emily A, Lockwood, Rowan, Byrnes, Jarrett E.K, Anderson, Sean C, Finnegan, Seth, Finkel, Zoe V, Harnik, Paul G, Lindberg, David R, Liow, Lee Hsiang, Lotze, Heike K, Mcclain, Craig R, Mcguire, Jenny L, O'Dea, Aaron, Pandolfi, John M, Simpson, Carl and Tittensor, Derek P (2015). Marine extinction risk shaped by trait-environment interactions over 500 million years. Global Change Biology, 21 (10), 3595-3607. doi: 10.1111/gcb.12963

Pratchett, Morgan S., Anderson, Kristen D., Hoogenboom, Mia O., Widman, Elizabeth, Baird, Andrew H., Pandolfi, John M., Edmunds, Peter J. and Lough, Janice M. (2015). Spatial, temporal and taxonomic variation in coral growth-implications for the structure and function of coral reef ecosystems. Oceanography and Marine Biology: an annual review, 53, 215-295. doi: 10.1201/b18733-7

Liu, En-tao, Zhao, Jian-xin, Clark, Tara R., Feng, Yue-xing, Leonard, Nicole D., Markham, Hannah L. and Pandolfi, John M. (2014). High-precision U-Th dating of storm-transported coral blocks on Frankland Islands, northern Great Barrier Reef, Australia. Palaeogeography, Palaeoclimatology, Palaeoecology, 414, 68-78. doi: 10.1016/j.palaeo.2014.08.017

Thurstan, Ruth H., Campbell, Alexander B. and Pandolfi, John M. (2014). Nineteenth century narratives reveal historic catch rates for Australian snapper (Pagrus auratus). Fish and Fisheries, 17 (1), 210-225. doi: 10.1111/faf.12103

Clark, Tara R., Roff, George, Zhao, Jian-xin, Feng, Yue-xing, Done, Terence J. and Pandolfi, John M. (2014). Testing the precision and accuracy of the U-Th chronometer for dating coral mortality events in the last 100 years. Quaternary Geochronology, 23, 35-45. doi: 10.1016/j.quageo.2014.05.002

Clark, Tara R., Zhao, Jian-xin, Roff, George, Feng, Yue-xing, Done, Terence J., Nothdurft, Luke D. and Pandolfi, John M. (2014). Discerning the timing and cause of historical mortality events in modern Porites from the Great Barrier Reef. Geochimica et Cosmochimica Acta, 138, 57-80. doi: 10.1016/j.gca.2014.04.022

Mihaljevic, Morana, Renema, Willem, Welsh, Kevin and Pandolfi, John M. (2014). Eocene-miocene shallow-water carbonate platforms and increased habitat diversity in Sarawak, Malaysia. Palaios, 29 (7), 378-391. doi: 10.2110/palo.2013.129

Pandolfi, John M. and Lovelock, Catherine E. (2014). Novelty trumps loss in global biodiversity. Science, 344 (6181), 266-267. doi: 10.1126/science.1252963

Sommer, Brigitte, Harrison, Peter L., Beger, Maria and Pandolfi, John M. (2014). Trait-mediated environmental filtering drives assembly at biogeographic transition zones. Ecology, 95 (4), 1000-1009. doi: 10.1890/13-1445.1

Rodriguez-Ramirez, Alberto, Grove, Craig A., Zinke, Jens, Pandolfi, John M. and Zhao, Jian-xin (2014). Coral luminescence identifies the Pacific Decadal Oscillation as a primary driver of river runoff variability impacting the southern Great Barrier Reef. PloS One, 9 (1) e84305, e84305.1-e84305.11. doi: 10.1371/journal.pone.0084305

Beger, Maria, Sommer, Brigitte, Harrison, Peter L., Smith, Stephen D. A. and Pandolfi, John M. (2014). Conserving potential coral reef refuges at high latitudes. Diversity and Distributions, 20 (3), 245-257. doi: 10.1111/ddi.12140

Lovelock, Catherine E., Reef, Ruth and Pandolﬁ, John M. (2014). Variation in elemental stoichiometry and RNA:DNA in four phyla of benthic organisms from coral reefs. Functional Ecology, 28 (5), 1299-1309. doi: 10.1111/1365-2435.12256

Pandolfi, John M. and Kiessling, Wolfgang (2014). Gaining insights from past reefs to inform understanding of coral reef response to global climate change. Current Opinion in Environmental Sustainability, 7, 52-58. doi: 10.1016/j.cosust.2013.11.020

Reymond, Claire E., Roff, George, Chivas, Allan R., Zhao, Jian-xin and Pandolfi, John M. (2013). Millennium-scale records of benthic foraminiferal communities from the central Great Barrier Reef reveal spatial differences and temporal consistency. Palaeogeography, Palaeoclimatology, Palaeoecology, 374, 52-61. doi: 10.1016/j.palaeo.2013.01.001

Poloczanska, Elvira S., Brown, Christopher J., Sydeman, William J., Kiessling, Wolfgang, Schoeman, David S., Moore, Pippa J., Brander, Keith, Bruno, John F., Buckley, Lauren B., Burrows, Michael T., Duarte, Carlos M., Halpern, Benjamin S., Holding, Johnna, Kappel, Carrie V., O'Connor, Mary I., Pandolfi, John M., Parmesan, Camille, Schwing, Franklin, Thompson, Sarah Ann and Richardson, Anthony J. (2013). Global imprint of climate change on marine life. Nature Climate Change, 3 (10), 919-925. doi: 10.1038/nclimate1958

Butler, I. R., Sommer, B., Zann, M., Zhao, J.-X. and Pandolfi, J. M. (2013). The impacts of flooding on the high-latitude, terrigenoclastic influenced coral reefs of Hervey Bay, Queensland, Australia. Coral Reefs, 32 (4), 1149-1163. doi: 10.1007/s00338-013-1064-7

Munday, Philip L., Warner, Robert R., Monro, Keyne, Pandolfi, John M. and Marshall, Dustin J. (2013). Predicting evolutionary responses to climate change in the sea. Ecology Letters, 16 (12), 1488-1500. doi: 10.1111/ele.12185

Berzunza-Sanchez, Maria Margarita, Gomez Cabrera, Maria del Carmen and Pandolfi, John M. (2013). Historical patterns of resource exploitation and the status of Papua New Guinea coral reefs. Pacific Science, 67 (3), 425-440. doi: 10.2984/67.3.9

Roff George, Clark, Tara R., Reymond, Claire E., Zhao, Jian-xin, Feng, Yuexing, McCook, Laurence J., Done, Terence J. and Pandolfi, John M. (2013). Palaeoecological evidence of a historical collapse of corals at Pelorus Island, inshore Great Barrier Reef, following European settlement. Proceedings of the Royal Society of London B: Biological Sciences, 280 (1750) 20122100, 1-10. doi: 10.1098/rspb.2012.2100

Kiessling, Wolfgang, Simpson, Carl, Beck, Brian, Mewis, Heike and Pandolfi, John M. (2012). Equatorial decline of reef corals during the last Pleistocene interglacial. Proceedings of the National Academy of Sciences of the United States of America, 109 (52), 21378-21383. doi: 10.1073/pnas.1214037110

Bode, Michael, Connolly, Sean R. and Pandolfi, John M. (2012). Species differences drive non-neutral structure in Pleistocene coral communities. The American Naturalist, 180 (5), 577-588. doi: 10.1086/667892

Harnik, Paul G., Lotze, Heike K., Anderson, Sean C., Finkel, Zoe V., Finnegan, Seth, Lindberg, David R., Liow, Lee Hsiang, Lockwood, Rowan, McClain, Craig R., McGuire, Jenny L., O’Dea, Aaron, Pandolfi, John M., Simpson, Carl and Tittensor, Derek P. (2012). Extinctions in ancient and modern seas. Trends In Ecology and Evolution, 27 (11), 608-617. doi: 10.1016/j.tree.2012.07.010

McLeod, Elizabeth, Green, Alison, Game, Edward, Anthony, Kenneth, Cinner, Joshua, Heron, Scott F., Kleypas, Joanie, Lovelock, Catherine E., Pandolfi, John M., Pressey, Robert L., Salm, Rodney, Schill, Steve and Woodroffe, Colin (2012). Integrating climate and ocean change vulnerability into conservation planning. Coastal Management, 40 (6), 651-672. doi: 10.1080/08920753.2012.728123

Reymond,Claire E., Lloyd, Alicia, Kline, David I., Dove, Sophie G. and Pandolfi, John M. (2012). Decline in growth of foraminifer Marginopora rossi under eutrophication and ocean acidification scenarios. Global Change Biology, 19 (1), 291-302. doi: 10.1111/gcb.12035

Muhs, Daniel R., Pandolfi, John M., Simmons, Kathleen R. and Schumann, R. Randall (2012). Sea-level history of past interglacial periods from uranium-series dating of corals, Curacao, Leeward Antilles islands. Quaternary Research, 78 (2), 157-169. doi: 10.1016/j.yqres.2012.05.008

Reef, Ruth, Pandolfi, John M. and Lovelock, Catherine E. (2012). The effect of nutrient enrichment on the growth, nucleic acid concentrations, and elemental stoichiometry of coral reef macroalgae. Ecology and Evolution, 2 (8), 1985-1995. doi: 10.1002/ece3.330

Blower, Dean C., Pandolfi, John M., Bruce, Barry D., Gomez-Cabrera, Maria del C. and Ovenden, Jennifer R. (2012). Population genetics of Australian white sharks reveals fine-scale spatial structure, transoceanic dispersal events and low effective population sizes. Marine Ecology-Progress Series, 455, 229-244. doi: 10.3354/meps09659

Pandolfi, John M. and Budd, Ann F. (2012). A festschrift for Jeremy B.C. Jackson and his integration of paleobiology, ecology, evolution, and conservation biology. Evolutionary Ecology, 26 (2), 227-232. doi: 10.1007/s10682-012-9556-4

Bromfield, Kate and Pandolfi, John M. (2012). Regional patterns of evolutionary turnover in Neogene coral reefs from the central Indo-West Pacific Ocean. Evolutionary Ecology, 26 (2), 375-391. doi: 10.1007/s10682-011-9483-9

Budd, Ann F., Nunez, Flavia L. D., Weil, Ernesto and Pandolfi, John M. (2012). Polymorphism in a common Atlantic reef coral (Montastraea cavernosa) and its long-term evolutionary implications. Evolutionary Ecology, 26 (2), 265-290. doi: 10.1007/s10682-010-9460-8

Clark, Tara R., Zhao, Jian-xin, Feng, Yue-xing, Done, Terry J., Jupiter, Stacy, Lough, Janice and Pandolfi, John M (2012). Spatial variability of initial Th-230/Th-232 in modern Porites from the inshore region of the Great Barrier Reef. Geochimica Et Cosmochimica Acta, 78, 99-118. doi: 10.1016/j.gca.2011.11.032

Burrows, Michael T., Schoeman, David S., Duarte, Carlos M., O'Connor, Mary I., Buckley, Lauren B., Kappel, Carrie V., Parmesan, Camille, Halpern, Benjamin S., Brown, Chris, Brander, Keith M., Bruno, John F., Pandolfi, John M., Sydeman, William J., Moore, Pippa, Kiessling, Wolfgang, Richardson, Anthony J. and Poloczanska, Elvira S. (2012). Invasive species unchecked by climate - Response. Science, 335 (6068), 538-539. doi: 10.1126/science.335.6068.538-a

Pandolfi, John M., Connolly, Sean R., Marshall, Dustin J. and Cohen, Anne L. (2011). The future of coral reefs: Response. Science, 334 (6062), 1495-1496. doi: 10.1126/science.334.6062.1495

Brown, Christopher J., Schoeman, David S., Sydeman, William J., Brander, Keith, Buckley, Lauren B., Burrows, Michael, Duarte, Carlos M., Moore, Pippa J., Pandolfi, John M., Poloczanska, Elvira, Venables, William and Richardson, Anthony J. (2011). Quantitative approaches in climate change ecology. Global Change Biology, 17 (12), 3697-3713. doi: 10.1111/j.1365-2486.2011.02531.x

Burrows, Michael T., Schoeman, David S., Buckley, Lauren B., Moore, Pippa, Poloczanska, Elvira S., Brander, Keith M., Brown, Chris, Bruno, John F., Duarte, Carlos M., Halpern, Benjamin S., Holding, Johnna, Kappel, Carrie V., Kiessling, Wolfgang, O'Connor, Mary I., Pandolfi, John M., Parmesan, Camille, Schwing, Franklin B., Sydeman, William J. and Richardson, Anthony J. (2011). The pace of shifting climate in marine and terrestrial ecosystems. Science, 334 (6056), 652-655. doi: 10.1126/science.1210288

Kittinger, John N., Pandolfi, John M., Blodgett, Jonathan H., Hunt, Terry L., Jiang, Hong, Maly, Kepa, McClenachan, Loren E., Schultz, Jennifer K. and Wilcox, Bruce A. (2011). Historical reconstruction reveals recovery in Hawaiian coral reefs. PLoS One, 6 (10) e25460, e25460-1-e25460-13. doi: 10.1371/journal.pone.0025460

Reymond, Claire E., Bode, Michael, Renema, Willem and Pandolfi, John (2011). Ecological incumbency impedes stochastic community assembly in Holocene foraminifera from the Huon Peninsula, Papua New Guinea. Paleobiology, 37 (4), 670-685. doi: 10.1666/09087.1

Hughes, T. P., Bellwood, D. R., Baird, A. H., Brodie, J., Bruno, J. F. and Pandolfi, J. M. (2011). Shifting base-lines, declining coral cover, and the erosion of reef resilience: comment on Sweatman et al. (2011). Coral Reefs, 30 (3), 653-660. doi: 10.1007/s00338-011-0787-6

Reymond, Claire E., Uthicke, S. and Pandolfi, John M. (2011). Inhibited growth in the photosymbiont-bearing foraminifer Marginopora vertebralis from the nearshore Great Barrier Reef, Australia. Marine Ecology: Progress Series, 435, 97-109. doi: 10.3354/meps09172

Pandolfi, John M., Connolly, Sean R., Marshall, Dustin J. and Cohen, Anne A. (2011). Projecting coral reef futures under global warming and ocean acidification. Science, 333 (6041), 418-422. doi: 10.1126/science.1204794

Pandolfi, John M. (2011). Presentation of the 2009 Paleontological Society Medal to Jeremy B. C. Jackson. Journal of Paleontology, 85 (3), 599-600. doi: 10.1666/0022-3360-85.3.599

Lybolt, Matt, Neil, David, Zhao, Jianxin, Feng, Yuexing, Yu, KeFu and Pandolfi, John (2011). Instability in a marginal coral reef: the shift from natural variability to a human-dominated seascape. Frontiers in Ecology and the Environment, 9 (3), 154-160. doi: 10.1890/090176

Reymond, Claire E., Uthicke, S. and Pandolfi, John M. (2011). Inhibited growth in the photosymbiont-bearing foraminifer Marginopora vertebralis from the nearshore Great Barrier Reef, Australia (vol 435, pg 97, 2011). Marine Ecology Progress Series, 441, 302-302. doi: 10.3354/meps09377

Narayan, Y. Roshni and Pandolfi, John M. (2010). Benthic foraminiferal assemblages from Moreton Bay, South-East Queensland, Australia: Applications in monitoring water and substrate quality in subtropical estuarine environments. Marine Pollution Bulletin, 60 (11), 2062-2078. doi: 10.1016/j.marpolbul.2010.07.012

Budd, Ann F. and Pandolfi, John M. (2010). Evolutionary novelty is concentrated at the edge of coral species distributions. Science, 328 (5985), 1558-1561. doi: 10.1126/science.1188947

Tager, Danika, Webster, Jody M., Potts, Donald C., Renema, Willem, Braga, Juan C. and Pandolfi, John M. (2010). Community dynamics of Pleistocene coral reefs during alternative climatic regimes. Ecology, 91 (1), 191-200. doi: 10.1890/08-0422.1

Brewer, TD, Cinner, JE, Green, A and Pandolfi, John M (2009). Thresholds and multiple scale interaction of environment, resource use, and market proximity on reef fishery resources in the Solomon Islands. BIOLOGICAL CONSERVATION, 142 (8), 1797-1807. doi: 10.1016/j.biocon.2009.03.021

Pandolfi, John M. (2009). Evolutionary impacts of fishing: Overfishing’s ‘Darwinian Debt’. Faculty of 1000 Biology, 1 (43), 1-3. doi: 10.3410/B1-43

Zhao, Jian-xin, Neil, David T., Feng, Yue-xing, Yu, Ke-fu and Pandolfi, John M. (2009). High-precision U-series dating of very young cyclone-transported coral reef blocks from Heron and Wistari reefs, southern Great Barrier Reef, Australia. Quaternary International, 195 (1-2), 122-127. doi: 10.1016/j.quaint.2008.06.004

Renema, W., Bellwood, D.R., Braga, J.C., Bromfield, K., Hall, R., Johnson, K.G., Lunt, P., Meyer, C.P., McMonagle, L.B., Morley, R.J., O'Dea, A., Todd, J.A., Wesselingh, F.P., Wilson, M.E.J. and Pandolfi, J.M. (2008). Hopping Hotspots: Global Shifts in Marine Biodiversity. Science, 321 (5889), 654-657. doi: 10.1126/science.1155674

Greenstein, B.J. and Pandolfi, J.M. (2008). Escaping the heat: range shifts of reef coral taxa in coastal Western Australia. Global Change Biology, 14 (3), 513-528. doi: 10.1111/j.1365-2486.2007.01506.x

Pandolfi, J.M. and Budd, A.F. (2008). Morphology and ecological zonation of Caribbean reef corals: the Montastraea 'annularis' species complex. Marine Ecology-Progress Series, 369, 89-102. doi: 10.3354/meps07570

Pandolfi, John M. (2007). A new, extinct pleistocene reef coral from the Montastraea ‘‘Annularis’’ species complex. Journal of Paleontology, 81 (3), 472-482. doi: 10.1666/pleo05046.1

Edinger, E. N., Burr, G. S., Pandolfi, J. M. and Ortiz, J. C. (2007). Age accuracy and resolution of Quaternary corals used as proxies for sea level. Earth And Planetary Science Letters, 253 (1-2), 37-49. doi: 10.1016/j.epsl.2006.10.014

Pandolfi, J. M. and Jackson, J. B. C. (2007). The role of algae. American Scientist, 95 (1), 5-5.

Hughes, Terry P., Bellwood, David R., Folke, Carl S., McCook, Laurence J. and Pandolfi, John M. (2007). No-take areas, herbivory and coral reef resilience. Trends In Ecology & Evolution, 22 (1), 1-3. doi: 10.1016/j.tree.2006.10.009

Pandolfi, J. M. (2006). Ecology - Corals fail a test of neutrality. Nature, 440 (7080), 35-36. doi: 10.1038/440035a

Pandolfi, J. M., Tudhope, A., Burr, G., Chappell, J., Edinger, E., Frey, M., Steneck, R., Sharma, C., Yeates, A., Jennions, M., Lescinsky, H. and Newton, A. (2006). Mass mortality following disturbance in Holocene coral reefs from Papua New Guinea. Geology, 34 (11), 949-952. doi: 10.1130/G22814A.1

Pandolfi, J. M. and Jackson, J. B. C. (2006). Ecological persistence interrupted in Caribbean coral reefs [Letter]. Ecology Letters, 9 (7), 818-826. doi: 10.1111/j.1461-0248.2006.00933.x

Greenstein, B. J., Pandolfi, J. M. and Blakeway, D. R. (2005). A fossil reef from the last interglacial, Western Australia. Coral Reefs, 24 (4), 593-593. doi: 10.1007/s00338-005-0043-z

Jackson, J. B. C., Ogden, J. C., Pandolfi, J. M., Baron, N., Bradbury, R. H., Guzman, H. M., Hughes, T. P., Kappel, C. V., Micheli, F., Possingham, H. and Sala, E. (2005). Reassessing US coral reefs - Response. Science, 308 (5729), 1740-1742. doi: 10.1126/science.308.5729.1740c

Pandolfi, JM (2005). Are U.S. coral reefs on the slippery slope to slime? (vol 307, pg 1725, 2005). Science, 308 (5729), 1742-1743.

Pandolfi, J. M. (2005). Erratum: Are U.S. coral reefs on the slippery slope to slime? (Science (March 18) (1725)). Science, 308 (5729), 1742-1743.

Pandolfi, J. M., Jackson, J. B. C., Baron, N., Bradbury, R. H., Guzman, H. M., Hughes, T. P., Kappel, C. V., Micheli, F., Ogden, J. C., Possingham, H. P. and Sala, E. (2005). Are US coral reefs on the slippery slope to slime?. Science, 307 (5716), 1725-1726. doi: 10.1126/science.1104258

Budd, A. E. and Pandolfi, J. M. (2004). Overlapping species boundaries and hybridization within the Monastraea "annularis" reef coral complex in the Pleistocene of the Bahama Islands. Paleobiology, 30 (3), 396-425. doi: 10.1666/0094-8373(2004)030

DiMichele, W. A., Behrensmeyer, A. K., Olszewski, T. D., Labandeira, C. C., Pandolfi, J. M., Wing, S. L. and Bobe, R. (2004). Long-term stasis in ecological assemblages: Evidence from the fossil record. Annual Review of Ecology Evolution And Systematics, 35 (1), 285-322. doi: 10.1146/annurev.ecolsys.35.120202.110110

Holcomb, M., Pandolfi, J. M., Macintyre, I. G. and Budd, A. F. (2004). Use of X-radiographs to distinguish members of the Montastraea annularis reef-coral species complex. Hydrobiologia, 530-31 (1 - 3), 211-222. doi: 10.1007/s10750-004-2652-x

Greenstein, B. J. and Pandolfi, J. M. (2003). Taphonomic alteration of reef corals: Effects of reef environment and coral growth form II: The Florida Keys. Palaios, 18 (6), 495-509. doi: 10.1669/0883-1351(2003)018<0495:TAORCE>2.0.CO;2

Pandolfi, J. M., Bradbury, R. H., Sala, E., Hughes, T. P., Bjorndal, K. A., Cooke, R. G., McArdle, D., McClenachan, L., Newman, M. J. H., Paredes, G., Warner, R. R., Jackson, J. B. C., Hughes, T. P., Baird, A. H., Bellwood, D. R., Connolly, S. R., Folke, C., Grosberg, R., Hoegh-Guldberg, O. and et al. (2003). Causes of coral reef degradation. Science, 302 (5650), 1502-1504. doi: 10.1126/science.302.5650.1502b

Hughes, TP, Baird, AH, Bellwood, DR, Connolly, SR, Folke, C, Grosberg, R, Hoegh-Guldberg, O, Jackson, JBC, Kleypas, J, Lough, JM, Marshall, P, Nystrom, M, Palumbi, SR, Pandolfi, JM, Rosen, B and Roughgarden, J (2003). Causes of coral reef degradation - Response. Science, 302 (5650), 1503-1504.

Pandolfi, John M., Bradbury, Roger H., Sala, Enric, Hughes, Terence P., Bjorndal, Karen A., Cooke, Richard G., McArdle, Deborah, McClenachan, Loren, Newman, Marah J. H., Paredes, Gustavo, Warner, Robert R. and Jackson, Jeremy B. C. (2003). Global trajectories of the long-term decline of coral reef ecosystems. Science, 301 (5635), 955-958. doi: 10.1126/science.1085706

Hughes, T. E., Baird, A. H., Bellwood, D. R., Card, M., Connolly, S. R., Folke, C., Grosberg, R., Hoegh-Guldberg, I. O., Jackson, J.R., Kleypas, J, Lough, J. M., Marshall, P., Nystrom, M., Palumbi, S. R., Pandolfi, J. M., Rosen, B. and Roughgarden, J. (2003). Climate change, human impacts, and the resilience of coral reefs. Science, 301 (5635), 929-933. doi: 10.1126/science.1085046

Pandolfi, J. M. (2002). Coral community dynamics at multiple scales. Coral Reefs, 21 (1), 13-23. doi: 10.1007/s00338-001-0204-7

Pandolfi, J. M., Lovelock, C. E. and Budd, A. F. (2002). Character release following extinction in a Caribbean reef coral species complex. Evolution, 56 (3), 479-501. doi: 10.1111/j.0014-3820.2002.tb01360.x

Strathmann, R. R., Hughes, T. R., Kuris, A. M., Lindeman, K. C., Morgan, S. G., Pandolfi, J. M. and Warner, R. R. (2002). Evolution of local recruitment and its consequences for marine populations. Bulletin of Marine Science, 70 (1), 377-396.

Pandolfi, John M. and Dimichele, William A. (2002). From the Incoming Editors. Paleobiology, 28 (1), 172-172. doi: 10.1666/0094-8373(2002)028<0172:FTIE>2.0.co;2

Jackson, Jeremy B. C., Kirby, Michael X., Berger, Wolfgang H., Bjorndal, Karen A., Botsford, Louis W., Bourque, Bruce J., Bradbury, Roger H., Cooke, Richard, Erlandson, Jon, Estes, James A., Hughes, Terence P., Kidwell, Susan, Lange, Carina B., Lenihan, Hunter S., Pandolfi, John M., Peterson, Charles H., Steneck, Robert S., Tegner, Mia J. and Warner, Robert R. (2001). Historical overfishing and the recent collapse of coastal ecosystems. Science, 293 (5530), 629-637. doi: 10.1126/science.1059199

Pandolfi, J. M. (2001). Numerical and taxonomic scale of analysis in paleoecological data sets: Examples from neo-tropical Pleistocene reef coral communities. Journal of Paleontology, 75 (3), 546-563. doi: 10.1666/0022-3360(2001)075<0546:NATSOA>2.0.CO;2

Pandolfi, J. M. and Jackson, J. B. C. (2001). Community structure of Pleistocene coral reefs of Curaçao, Netherlands Antilles. Ecological Monographs, 71 (1), 49-67. doi: 10.1890/0012-9615(2001)071[0049:CSOPCR]2.0.CO;2

Edinger, E. N., Pandolfi, J. M. and Kelley, R. A. (2001). Community structure of Quaternary coral reefs compared with Recent life and death assemblages. Paleobiology, 27 (4), 669-694. doi: 10.1666/0094-8373(2001)027<0669:CSOQCR>2.0.CO;2

Pandolfi, John M. (2001). Review of: Evolutionary paleoecology : The ecological context of macroevolutionary change, edited by Warren D. Allmon and David J. Bottjer, New York : Columbia University Press, 2001. Carbonates and Evaporites, xx-xx.

Pandolfi, JM, Llewellyn, G and Jackson, JBC (1999). Pleistocene reef environments, constituent grains, and coral community structure: Curacao, Netherlands Antilles. Coral Reefs, 18 (2), 107-122. doi: 10.1007/s003380050165

Pandolfi, JM (1999). Response of Pleistocene coral reefs to environmental change over long temporal scales. American Zoologist, 39 (1), 113-130. doi: 10.1093/icb/39.1.113

Greenstein, BJ, Curran, HA and Pandolfi, JM (1998). Shifting ecological baselines and the demise of Acropora cervicornis in the western North Atlantic and Caribbean Province: a Pleistocene perspective. Coral Reefs, 17 (3), 249-261. doi: 10.1007/s003380050125

Pandolfi, JM, Robertson, DR and Kirtley, DW (1998). Roles of worms in reef-building. Coral Reefs, 17 (2), 120-120. doi: 10.1007/s003380050105

Pandolfi, John M. and Greenstein, Benjamin J. (1997). Preservation of community structure in death assemblages of deep-water Caribbean reef corals. Limnology and Oceanography, 42 (7), 1505-1516. doi: 10.4319/lo.1997.42.7.1505

Greenstein, BJ and Pandolfi, JM (1997). Preservation of community structure in modern reef coral life and death assemblages of the Florida Keys: Implications for the Quaternary fossil record of coral reefs. Bulletin of Marine Science, 61 (2), 431-452.

Pandolfi, J. M. and Greenstein, B. J. (1997). Taphonomic alteration of reef corals: Effects of reef environment and coral growth form .1. The Great Barrier Reef. Palaios, 12 (1), 27-42. doi: 10.2307/3515292

Chappell, J, Omura, A, Esat, T, McCulloch, M, Pandolfi, J, Ota, Y and Pillans, B (1996). Reconciliation of late Quaternary sea levels derived from coral terraces at Huon Peninsula with deep sea oxygen isotope records. Earth and Planetary Science Letters, 141 (1-4), 227-236. doi: 10.1016/0012-821X(96)00062-3

Pandolfi, JM (1996). Limited membership in Pleistocene reef coral assemblages from the Huon Peninsula, Papua New Guinea: Constancy during global change. Paleobiology, 22 (2), 152-176. doi: 10.1017/S0094837300016158

Pandolfi, JM and Minchin, PR (1996). A comparison of taxonomic composition and diversity between reef coral life and death assemblages in Madang Lagoon, Papua New Guinea. Palaeogeography Palaeoclimatology Palaeoecology, 119 (3-4), 321-341. doi: 10.1016/0031-0182(95)00016-X

PANDOLFI, JOHN M. (1995). Geomorphology of the uplifted Pleistocene atoll at Henderson Island, Pitcairn Group. Biological Journal of the Linnean Society, 56 (1-2), 63-77. doi: 10.1006/bijl.1995.0054

Greenstein, BJ, Pandolfi, JM and Moran, PJ (1995). Taphonomy of Crown-of-Thorns Starfish - Implications for Recognizing Ancient Population Outbreaks. Coral Reefs, 14 (2), 91-97. doi: 10.1007/BF00303429

Pandolfi, JM, Best, Mmr and Murray, SP (1994). Coseismic Event of May 15, 1992, Huon Peninsula, Papua-New-Guinea - Comparison with Quaternary Tectonic History. Geology, 22 (3), 239-242. doi: 10.1130/0091-7613(1994)022<0239:CEOMHP>2.3.CO;2

Sheehan, P. M., Pandolfi, J. M. and Ketner, K. B. (1993). Isolated carbonate bodies composed of stacked debris-flow deposits on a fine-grained carbonate lower slope of Devonian age, Antelope Peak, Elko County, Nevada. US Geological Survey Bulletin, 1988 E.

Pandolfi, JM (1992). Successive Isolation Rather Than Evolutionary Centers for the Origination of Indo-Pacific Reef Corals. Journal of Biogeography, 19 (6), 593-609. doi: 10.2307/2845703

Pandolfi, JM (1992). A Paleobiological Examination of the Geological Evidence for Recurring Outbreaks of the Crown-of-Thorns Starfish, Acanthaster-Planci (L). Coral Reefs, 11 (2), 87-93. doi: 10.1007/BF00357427

Wallace, Carden C., Pandolfi, John M., Young, Amanda and Wolstenholme, Jacqueline (1991). Indo-pacific coral biogeography: A case study from the Acropora selago group. Australian Systematic Botany, 4 (1), 199-210. doi: 10.1071/SB9910199

Benzie, Jah and Pandolfi, JM (1991). Allozyme Variation in Marginopora-Vertebralis (Foraminifera, Miliolidae) From Coral-Reef Habitats in the Great-Barrier-Reef, Australia. Journal of Foraminiferal Research, 21 (3), 222-227. doi: 10.2113/gsjfr.21.3.222

Pandolfi, JM (1989). Phylogenetic Analysis of the Early Tabulate Corals. Palaeontology, 32 (4), 745-764.

Pandolfi, JM and Burke, CD (1989). Shape-Analysis of 2 Sympatric Coral Species - Implications for Taxonomy and Evolution. Lethaia, 22 (2), 183-193. doi: 10.1111/j.1502-3931.1989.tb01680.x

Pandolfi, JM and Burke, CD (1989). Environmental Distribution of Colony Growth Form in the Favositid Pleurodictyum-Americanum. Lethaia, 22 (1), 69-84. doi: 10.1111/j.1502-3931.1989.tb01170.x

Hurst, John M., Sheehan, Peter M. and Pandolfi, John M. (1985). Reply on "Silurian carbonate shelf and slope evolution in Nevada: A history of faulting, drowning, and progradation". Geology, 13 (12), 888-889. doi: 10.1130/0091-7613(1985)13<888:CAROSB>2.0.CO;2

Hurst, JM, Sheehan, PM and Pandolfi, JM (1985). Silurian Carbonate Shelf and Slope Evolution in Nevada - a History of Faulting, Drowning, and Progradation. Geology, 13 (3), 185-188. doi: 10.1130/0091-7613(1985)13<185:SCSASE>2.0.CO;2

Murphy, MA, Hurst, JM, Sheehan, PM and Pandolfi, JM (1985). Silurian Carbonate Shelf and Slope Evolution in Nevada - a History of Faulting, Drowning, and Progradation - Comment. Geology, 13 (12), 888-889. doi: 10.1130/0091-7613(1985)13<888:CAROSA>2.0.CO;2

Hurst, JM, Sheehan, PM and Pandolfi, JM (1985). Silurian Carbonate Shelf and Slope Evolution in Nevada - a History of Faulting, Drowning, and Progradation - Reply. Geology, 13 (10), 746-&. doi: 10.1130/0091-7613(1985)13<746a:CAROSC>2.0.CO;2

Richardson, Anthony J., Brown, Christopher J., Brander, Keith, Bruno, John F., Buckley, Lauren, Burrows, Michael T., Duarte, Carlos M., Halpern, Benjamin S., Hoegh-Guldberg, Ove, Holding, Johnna, Kappel, Carrie V., Kiessling, Wolfgang, Moore, Pippa J., O'Connor, Mary I., Pandolfi, John M., Parmesan, Camille, Schoeman, David S., Schwing, Frank, Sydeman, William J. and Poloczanska, Elvira S. (2012). Climate change and marine life. London, United Kingdom: The Royal Society Publishing. doi: 10.1098/rsbl.2012.0530

Reymond, Claire E., Uthicke, Sven and Pandolfi, John M. (2012). Tropical Foraminifera as indicators of water quality and temperature. 12th International Coral Reef Symposium, Cairns, QLD, Australia, 9-13 July 2012. Townsville, QLD, Australia: James Cook University.

Beger, Maria, Babcock, Russ, Booth, David J., Bucher, Daniel, Condie, Scott A., Creese, Bob, Cvitanovic, Christopher, Dalton, Steve J., Harrison, Peter, Hoey, Andrew, Jordan, Alan, Loder, Jennifer, Malcolm, Hamish, Purcell, Steven W., Roelfsema, Chris, Sachs, Patrick, Smith, Stephen D. A., Sommer, Brigitte, Stuart-Smith, Rick, Thomson, Damian, Wallace, Carden C., Zann, Maria and Pandolfi, John M. (2011). Research challenges to improve the management and conservation of subtropical reefs to tackle climate change threats. Australia: Wiley-Blackwell Publishing Asia. doi: 10.1111/j.1442-8903.2011.00573.x

Estrada Alvarez, L. M., Edinger, E. N. and Pandolfi, J. M. (2004). Taphonomy of modern corals from Madang lagoon, Papua New Guinea. 14th Canadian Paleontology Conference, Huntsman Marine Science Centre in St. Andrews, New Brunswick, Canada, 23-26 September 2004. St. John's, Canada: Geological Association of Canada.

Best, M. M. R., Burniaux, P. and Pandolfi, J. M. (2004). Experimental Bivalve Taphonomy in Reefs of Madang Lagoon, Papua New Guinea. 14th Canadian Paleontology Conference, Huntsman Marine Science Centre in St. Andrews, New Brunswick, Canada, 23-26 September 2004. St. John's, Canada: Geological Association of Canada.

Gomez-Cabrera, Maria, Young, J M, Roff, G, Staples, T, Ortiz, J C, Pandolfi, John M and Cooper, A (2019). Ancient DNA from Pandora Reef, GBR. The University of Queensland. (Dataset) doi: 10.14264/uql.2019.2

Thurston, Ruth H., Buckley, Sarah M. and Pandolfi, John M. (2016). Using commercial and recreational fisher knowledge to reconstruct historical catch rates for Queensland Snapper (Chrysophrys auratus), Spanish Mackerel (Scomberomorus commerson) and Coral Trout (Plectropomus spp.) Long-term data for incorporation into future stock assessments. Canberra, ACT, Australia: Fisheries Research and Development Corporation.

Sommer, Brigitte, Beger, Maria and Pandolfi, John (2014). Seasonal and temporal changes in reef fauna at Julian Rocks 2010 to 2013. St Lucia, QLD, Australia: University of Queensland.

Tobin, Andrew, Heupel, Michelle, Simpfendorfer, Colin, Pandolfi, John, Thurstan, Ruth and Buckley, Sarah (2014). Utilising innovative technology to better understand Spanish mackerel spawning aggregations and the protection offered by marine protected areas. Deakin, ACT, Australia: Fisheries Research and Development Corporation.

Pandolfi, J. M., Jackson, J. B. C. and Geister, J. (2001). Geologically sudden natural extinction of two widespread Late Pleistocene Caribbean reef corals.

Pandolfi, John M. (2001). Ancient reefs.

Professor John Pandolfi

Researcher biography

Areas of research

Professor John Pandolfi

Researcher biography

Publications

Book Chapters

Journal Articles

Conference Papers

Data Collection

Research Reports

Reference Entries

Areas of research