Journal Articles
Gilman, Eric, Chaloupka, Milani, Posanau, Nialangis, Hidalgo, Marcelo, Pokajam, Sylvester, Papaol, Donald, Nanguromo, Adrian and Poisson, Francois (2024). Evidence to inform spatiotemporal management of a western Pacific Ocean tuna purse seine fishery. Ecological Applications, e3054. doi: 10.1002/eap.3054
Gilman, Eric, Chaloupka, Milani, Debski, Igor, Kim, Mi Ae, Kingma, Eric and Ochi, Daisuke (2024). Synthesising a network of evidence on a seabird bycatch mitigation measure. Fish and Fisheries. doi: 10.1111/faf.12864
Gilman, Eric, Chaloupka, Milani, Pacini, Aude and Kingma, Eric (2024). Exploring odontocete depredation rates in a pelagic longline fishery. PLoS One, 19 (3) e0301072, 1-12. doi: 10.1371/journal.pone.0301072
Gilman, Eric and Chaloupka, Milani (2024). Evidence from interpretable machine learning to inform spatial management of Palau's tuna fisheries. Ecosphere, 15 (2) e4751. doi: 10.1002/ecs2.4751
Gilman, Eric, Chaloupka, Milani, Taylor, Nathan, Nelson, Lauren, Friedman, Kim and Murua, Hilario (2024). Global governance guard rails for sharks: Progress towards implementing the United Nations international plan of action. Fish and Fisheries, 25 (1), 1-17. doi: 10.1111/faf.12788
Gilman, Eric, Chaloupka, Milani, Bellquist, Lyall, Bowlby, Heather and Taylor, Nathan (2023). Individual and fleetwide bycatch thresholds in regional fisheries management frameworks. Reviews in Fish Biology and Fisheries, 34 (1), 253-270. doi: 10.1007/s11160-023-09811-5
Gilman, Eric, Chaloupka, Milani, Booth, Hollie, Hall, Martin, Murua, Hilario and Wilson, Jono (2023). Bycatch-neutral fisheries through a sequential mitigation hierarchy. Marine Policy, 150 105522, 1-13. doi: 10.1016/j.marpol.2023.105522
Gilman, Eric, Evans, Tom, Pollard, Iain and Chaloupka, Milani (2023). Adjusting time-of-day and depth of fishing provides an economically viable solution to seabird bycatch in an albacore tuna longline fishery. Scientific Reports, 13 (1) 2621, 1-7. doi: 10.1038/s41598-023-29616-7
Gilman, Eric and Chaloupka, Milani (2023). Applying a sequential evidence hierarchy, with caveats, to support prudent fisheries bycatch policy. Reviews in Fish Biology and Fisheries, 33 (1), 137-146. doi: 10.1007/s11160-022-09745-4
Gilman, Eric, Chaloupka, Milani, Benaka, Lee R., Bowlby, Heather, Fitchett, Mark, Kaiser, Michel and Musyl, Michael (2022). Phylogeny explains capture mortality of sharks and rays in pelagic longline fisheries: a global meta-analytic synthesis. Scientific Reports, 12 (1) 18164, 1-14. doi: 10.1038/s41598-022-21976-w
Goethel, Daniel R., Omori, Kristen L., Punt, André E., Lynch, Patrick D., Berger, Aaron M., de Moor, Carryn L., Plagányi, Éva E., Cope, Jason M., Dowling, Natalie A., McGarvey, Richard, Preece, Ann L., Thorson, James T., Chaloupka, Milani, Gaichas, Sarah, Gilman, Eric, Hesp, Sybrand A., Longo, Catherine, Yao, Nan and Methot, Richard D. (2022). Oceans of plenty? Challenges, advancements, and future directions for the provision of evidence-based fisheries management advice. Reviews in Fish Biology and Fisheries, 33 (2), 1-36. doi: 10.1007/s11160-022-09726-7
Medeiros, Luciana, Chaloupka, Milani, Bolten, Alan B., von Muhlen, Eduardo M., Santos, Alexsandro, Marcondes, Ana C. J., Thomé, João C. A., Marcovaldi, Maria Ângela and Bjorndal, Karen A. (2022). Tracking green turtle nesting trends at a remote oceanic rookery. Marine Biology, 169 (5) 68. doi: 10.1007/s00227-022-04054-7
Gilman, Eric, Musyl, Michael, Wild, Michael, Rong, Hua and Chaloupka, Milani (2022). Investigating weighted fishing hooks for seabird bycatch mitigation. Scientific Reports, 12 (1) 2833, 2833. doi: 10.1038/s41598-022-06875-4
Gilman, Eric, Hall, Martin, Booth, Hollie, Gupta, Trisha, Chaloupka, Milani, Fennell, Hannah, Kaiser, Michel J., Karnad, Divya and Milner-Gulland, E. J. (2022). A decision support tool for integrated fisheries bycatch management. Reviews in Fish Biology and Fisheries, 32 (2), 441-472. doi: 10.1007/s11160-021-09693-5
Mumby, Peter J., Chaloupka, Milani, Bozec, Yves‐Marie, Steneck, Robert S. and Montero‐Serra, Ignasi (2021). Revisiting the evidentiary basis for ecological cascades with conservation impacts. Conservation Letters, 15 (1) e12847. doi: 10.1111/conl.12847
Gilman, Eric, Musyl, Michael, Suuronen, Petri, Chaloupka, Milani, Gorgin, Saeid, Wilson, Jono and Kuczenski, Brandon (2021). Highest risk abandoned, lost and discarded fishing gear. Scientific Reports, 11 (1) 7195, 7195. doi: 10.1038/s41598-021-86123-3
Hilborn, Ray, Agostini, Vera N., Chaloupka, Milani, Garcia, Serge M., Gerber, Leah R., Gilman, Eric, Hanich, Quentin, Himes‐Cornell, Amber, Hobday, Alistair J., Itano, David, Kaiser, Michel J., Murua, Hilario, Ovando, Daniel, Pilling, Graham M., Rice, Jake C., Sharma, Rishi, Schaefer, Kurt M., Severance, Craig J., Taylor, Nathan G. and Fitchett, Mark (2021). Area‐based management of blue water fisheries: current knowledge and research needs. Fish and Fisheries, 23 (2), 492-518. doi: 10.1111/faf.12629
Gilman, Eric, Chaloupka, Milani and Sieben, Chrissie (2021). Ecological risks of a data-limited fishery using an ensemble of approaches. Marine Policy, 133 104752, 104752. doi: 10.1016/j.marpol.2021.104752
Gilman, Eric, Chaloupka, Milani, Ishizaki, Asuka, Carnes, Mathew, Naholowaa, Hollyann, Brady, Colby, Ellgen, Sarah and Kingma, Eric (2021). Tori lines mitigate seabird bycatch in a pelagic longline fishery. Reviews in Fish Biology and Fisheries, 31 (3), 653-666. doi: 10.1007/s11160-021-09659-7
Schaefer, Kurt M., Fuller, Daniel W. and Chaloupka, Milani (2021). Performance evaluation of a shallow prototype versus a standard depth traditional design drifting fish-aggregating device in the equatorial eastern Pacific tuna purse-seine fishery. Fisheries Research, 233 105763, 105763. doi: 10.1016/j.fishres.2020.105763
Whiting, Andrea U., Chaloupka, Milani, Pilcher, Nicolas, Basintal, Paul and Limpus, Colin J. (2021). Sampling nesting sea turtles: optimizing survey design to minimize error. Marine Ecology Progress Series, 674, 257-270. doi: 10.3354/MEPS13824
Gilman, E., Perez Roda, A., Huntington, T., Kennelly, S. J., Suuronen, P., Chaloupka, M. and Medley, P. A.H. (2020). Benchmarking global fisheries discards. Scientific Reports, 10 (1) 14017, 14017. doi: 10.1038/s41598-020-71021-x
Gilman, Eric, Chaloupka, Milani, Bach, Pascal, Fennell, Hannah, Hall, Martin, Musyl, Michael, Piovano, Susanna, Poisson, Francois and Song, Liming (2020). Effect of pelagic longline bait type on species selectivity: a global synthesis of evidence. Reviews in Fish Biology and Fisheries, 30 (3), 535-551. doi: 10.1007/s11160-020-09612-0
Gilman, Eric, Chaloupka, Milani, Fitchett, Mark, Cantrell, Danielle L. and Merrifield, Matt (2020). Ecological responses to blue water MPAs. PloS One, 15 (7) e0235129, 1-27. doi: 10.1371/journal.pone.0235129
Gilman, Eric, De Ramón Castejón, Vicente, Loganimoce, Eparama and Chaloupka, Milani (2020). Capability of a pilot fisheries electronic monitoring system to meet scientific and compliance monitoring objectives. Marine Policy, 113 103792, 1-5. doi: 10.1016/j.marpol.2019.103792
Whiting, Andrea U., Chaloupka, Milani and Limpus, Colin J. (2020). Sampling nesting sea turtles: impact of survey error on trend detection. Marine Ecology Progress Series, 634, 213-223. doi: 10.3354/meps13202
Gilman, Eric, Kaiser, Michel J. and Chaloupka, Milani (2019). Do static and dynamic marine protected areas that restrict pelagic fishing achieve ecological objectives?. Ecosphere, 10 (12) e02968, 1-38. doi: 10.1002/ecs2.2968
Gilman, Eric, Chaloupka, Milani, Dagorn, Laurent, Hall, Martin, Hobday, Alistair, Musyl, Michael, Pitcher, Tony, Poisson, Francois, Restrepo, Victor and Suuronen, Petri (2019). Robbing Peter to pay Paul: replacing unintended cross-taxa conflicts with intentional tradeoffs by moving from piecemeal to integrated fisheries bycatch management. Reviews in Fish Biology and Fisheries, 29 (1), 93-123. doi: 10.1007/s11160-019-09547-1
Bjorndal, Karen A., Bolten, Alan B. and Chaloupka, Milani (2019). Green turtle somatic growth dynamics: distributional regression reveals effects of differential emigration. Marine Ecology Progress Series, 616, 185-195. doi: 10.3354/meps12946
Lam, Vivian Y. Y., Chaloupka, Milani, Thompson, Angus, Doropoulos, Christopher and Mumby, Peter J. (2018). Acute drivers influence recent inshore Great Barrier Reef dynamics. Proceedings of the Royal Society B: Biological Sciences, 285 (1890) 20182063, 20182063. doi: 10.1098/rspb.2018.2063
Gilman, Eric, Chaloupka, Milani and Musyl, Michael (2018). Effects of pelagic longline hook size on species- and size-selectivity and survival. Reviews in Fish Biology and Fisheries, 28 (2), 417-433. doi: 10.1007/s11160-017-9509-7
Pfaller, Joseph B., Chaloupka, Milani, Bolten, Alan B. and Bjorndal, Karen A. (2018). Phylogeny, biogeography and methodology: a meta-analytic perspective on heterogeneity in adult marine turtle survival rates. Scientific Reports, 8 (1) 5852, 5852. doi: 10.1038/s41598-018-24262-w
Gilman, Eric, Suuronen, Petri and Chaloupka, Milani (2017). Discards in global tuna fisheries. Marine Ecology Progress Series, 582, 231-252. doi: 10.3354/meps12340
Bjorndal, Karen A., Bolten, Alan B., Chaloupka, Milani, Saba, Vincent S., Bellini, Claudio, Marcovaldi, Maria A. G., Santos, Armando J. B., Bortolon, Luis Felipe Wurdig, Meylan, Anne B., Meylan, Peter A., Gray, Jennifer, Hardy, Robert, Brost, Beth, Bresette, Michael, Gorham, Jonathan C., Connett, Stephen, Crouchley, Barbara Van Sciver, Dawson, Mike, Hayes, Deborah, Diez, Carlos E., van Dam, Robert P., Willis, Sue, Nava, Mabel, Hart, Kristen M., Cherkiss, Michael S., Crowder, Andrew G., Pollock, Clayton, Hillis-Starr, Zandy, Munoz Teneria, Fernando A. ... Kenyon, Lory (2017). Ecological regime shift drives declining growth rates of sea turtles throughout the West Atlantic. Global Change Biology, 23 (11), 4556-4568. doi: 10.1111/gcb.13712
Klein, Carissa J., Beher, Jutta, Chaloupka, Milani, Hamann, Mark, Limpus, Colin and Possingham, Hugh P. (2017). Prioritization of Marine Turtle Management Projects: A Protocol that Accounts for Threats to Different Life History Stages. Conservation Letters, 10 (5), 547-554. doi: 10.1111/conl.12324
Groom, Rachel A., Griffiths, Anthony D. and Chaloupka, Milani (2017). Estimating long-term trends in abundance and survival for nesting flatback turtles in Kakadu National Park, Australia. Endangered Species Research, 32 (1), 203-211. doi: 10.3354/esr00795
Gilman, Eric, Chaloupka, Milani, Merrifield, Matt, Malsol, Nanette D. and Cook, Chuck (2016). Standardized catch and survival rates, and effect of a ban on shark retention, Palau pelagic longline fishery. Aquatic Conservation: Marine and Freshwater Ecosystems, 26 (6), 1031-1062. doi: 10.1002/aqc.2599
Gilman, Eric, Chaloupka, Milani, Swimmer, Yonat and Piovano, Susanna (2016). A cross-taxa assessment of pelagic longline by-catch mitigation measures: conflicts and mutual benefits to elasmobranchs. Fish and Fisheries, 17 (3), 748-784. doi: 10.1111/faf.12143
Gilman, Eric, Chaloupka, Milani, Peschon, John and Ellgen, Sarah (2016). Risk factors for seabird bycatch in a pelagic longline tuna fishery. PLoS ONE, 11 (5) e0155477, e0155477. doi: 10.1371/journal.pone.0155477
Bjorndal, Karen A., Chaloupka, Milani, Saba, Vincent S., Diez, Carlos E., van Dam, Robert P., Krueger, Barry H., Horrocks, Julia A., Santos, Armando J. B., Bellini, Claudio, Marcovaldi, Maria A. G., Nava, Mabel, Willis, Sue, Godley, Brendan J., Gore, Shannon, Hawkes, Lucy A., McGowan, Andrew, Witt, Matthew J., Stringell, Thomas B., Sanghera, Amdeep, Richardson, Peter B., Broderick, Annette C., Phillips, Quinton, Calosso, Marta C., Claydon, John A. B., Blumenthal, Janice, Moncada, Felix, Nodarse, Gonzalo, Medina, Yosvani, Dunbar, Stephen G. ... Bolten, Alan B. (2016). Somatic growth dynamics of West Atlantic hawksbill sea turtles: a spatio-temporal perspective. Ecosphere, 7 (5) e01279, 1-14. doi: 10.1002/ecs2.1279
Fondo, Esther N., Chaloupka, Milani, Heymans, Johanna J. and Skilleter, Greg A. (2015). Banning fisheries discards abruptly has a negative impact on the population dynamics of charismatic marine megafauna. PLoS One, 10 (12) e0144543, 1-11. doi: 10.1371/journal.pone.0144543
Richards, Russell G. and Chaloupka, Milani (2015). Using a weight-structured oyster population dynamic model to explore top-down control of coastal water quality in a subtropical embayment. ICES Journal of Marine Science, 72 (2), 403-413. doi: 10.1093/icesjms/fsu119
Richards, Russell, Chaloupka, Milani, Strauss, Darrell and Tomlinson, Rodger (2014). Using generalized additive modelling to understand the drivers of long-term nutrient dynamics in the Broadwater Estuary (a subtropical estuary), Gold Coast, Australia. Journal of Coastal Research, 30 (6), 1321-1329. doi: 10.2112/JCOASTRES-D-12-00190.1
Whiting, Andrea U., Chaloupka, Milani, Pilcher, Nicolas, Basintal, Paul and Limpus, Colin J. (2014). Comparison and review of models describing sea turtle nesting abundance. Marine Ecology Progress Series, 508, 233-246. doi: 10.3354/meps10832
Whiting, Andrea U., Chaloupka, Milani and Limpus, Colin J. (2013). Comparing sampling effort and errors in abundance estimates between short and protracted nesting seasons for sea turtles. Journal of Experimental Marine Biology and Ecology, 449, 165-170. doi: 10.1016/j.jembe.2013.09.016
Pfaller, Joseph B., Bjorndal, Karen A., Chaloupka, Milani, Williams, Kristina L., Frick, Michael G. and Bolten, Alan B. (2013). Accounting for Imperfect Detection Is Critical for Inferring Marine Turtle Nesting Population Trends. PLoS One, 8 (4) e62326, e62326.1-e62326.5. doi: 10.1371/journal.pone.0062326
Pilcher, Nicolas and Chaloupka, Milani (2013). Using community-based monitoring to estimate demographic parameters for a remote nesting population of the Critically Endangered leatherback turtle. Endangered Species Research, 20 (1), 49-57. doi: 10.3354/esr00480
Gilman, Eric, Chaloupka, Milani, Read, Andrew, Dalzell, Paul, Holetschek, Jorg and Curtice, Corrie (2012). Hawaii longline tuna fishery temporal trends in standardized catch rates and length distributions and effects on pelagic and seamount ecosystems. Aquatic Conservation: Marine and Freshwater Ecosystems, 22 (4), 446-488. doi: 10.1002/aqc.2237
Prince, Robert I. T. and Chaloupka, Milani (2012). Estimating demographic parameters for a critically endangered marine species with frequent reproductive omission: Hawksbill turtles nesting at Varanus Island, Western Australia. Marine Biology, 159 (2), 355-363. doi: 10.1007/s00227-011-1813-5
Richards, Russell, Chaloupka, Milani, Sano, Marcello and Tomlinson, Rodger (2011). Modelling the effects of ‘coastal’ acidification on copper speciation. Ecological Modelling, 222 (19), 3559-3567. doi: 10.1016/j.ecolmodel.2011.08.017
Wallace, Bryan P., DiMatteo, Andrew D., Bolten, Alan B., Chaloupka, Milani Y., Hutchinson, Brian J., Abreu-Grobois, F. Alberto, Mortimer, Jeanne A., Seminoff, Jeffrey A., Amorocho, Diego, Bjorndal, Karen A., Bourjea, Jerome, Bowen, Brian W., Duenas, Raquel Briseno, Casale, Paolo, Choudhury, B. C., Costa, Alice, Dutton, Peter H., Fallabrino, Alejandro, Finkbeiner, Elena M., Girard, Alexandre, Girondot, Marc, Hamann, Mark, Hurley, Brendan J., Lopez-Mendilaharsu, Milagros, Marcovaldi, Maria Angela, Musick, John A., Nel, Ronel, Pilcher, Nicolas J., Troeng, Sebestian ... Mast, Roderic B. (2011). Global conservation priorities for marine turtles. PLoS One, 6 (9) e24510, 1-14. doi: 10.1371/journal.pone.0024510
Krueger, Barry H., Chaloupka, Milani Y., Leighton, Patrick A., Dunn, Jennifer A. and Horrocks, Julia A. (2011). Somatic growth rates for a hawksbill turtle population in coral reef habitat around Barbados. Marine Ecology Progress Series, 432, 269-276. doi: 10.3354/meps09125
Bjorndal, Karen A., Bowen, Brian W., Chaloupka, Milani, Crowder, Larry B., Heppell, Selina S., Jones, Cynthia M., Lutcavage, Molly E., Policansky, David, Solow, Andrew R. and Witherington, Blair E. (2011). Better science needed for restoration in the Gulf of Mexico. Science, 331 (6017), 537-538. doi: 10.1126/science.1199935
Forestell, Paul H., Kaufman, Gregory D. and Chaloupka, Milani (2011). Long term trends in abundance of humpback whales in Hervey Bay, Australia. Journal of Cetacean Research and Management (Spec. 3), 237-241.
Richards, Russell G., Chaloupka, Milani and Tomlinson, Rodger (2010). Towards an integrated ecosystem-based bioaccumulation and metal speciation model. Ecosystems, 13 (8), 1303-1318. doi: 10.1007/s10021-010-9392-8
Wallace, Bryan P., DiMatteo, Andrew D., Hurley, Brendan J., Finkbeiner, Elena M., Bolten, Alan B., Chaloupka, Milani Y., Hutchinson, Brian J., Abreu-Grobois, F. Alberto, Amorocho, Diego, Bjorndal, Karen A., Bourjea, Jerome, Bowen, Brian W., Dueñas, Raquel Briseño, Casale, Paolo, Choudhury, B. C., Costa, Alice, Dutton, Peter H., Fallabrino, Alejandro, Girard, Alexandre, Girondot, Marc, Godfrey, Matthew H., Hamann, Mark, López-Mendilaharsu, Milagros, Marcovaldi, Maria Angela, Mortimer, Jeanne A., Musick, John A., Nel, Ronel, Pilcher, Nicolas J., Seminoff, Jeffrey A. ... Mast, Roderic B. (2010). Regional Management Units for marine turtles: A novel framework for prioritizing conservation and research across multiple scales. PLoS ONE, 5 (12) e15465, e15465-1-e15465-11. doi: 10.1371/journal.pone.0015465
Gilman, Eric, Gearhart, Jeff, Price, Blake, Eckert, Scott, Milliken, Henry, Wang, John, Swimmer, Yonat, Shiode, Daisuke, Abe, Osamu, Peckham, S. Hoyt, Chaloupka, Milani, Hall, Martin, Mangel, Jeff, Alfaro-Shigueto, Joanna, Dalzell, Paul and Ishizaki, Asuka (2010). Mitigating sea turtle by-catch in coastal passive net fisheries. Fish and Fisheries, 11 (1), 57-88. doi: 10.1111/j.1467-2979.2009.00342.x
Hamann, M., Godfrey, M. H., Seminoff, J. A., Arthur, K., Barata, P. C. R., Bjorndal, K. A., Bolten, A. B., Broderick, A. C., Campbell, L. M., Carreras. C., Casale, P., Chaloupka, M., Chan, S. K. F., Coyne, M. S., Crowder, L. B., Diez, C. E., Dutton, P. H., Epperly, S. P., Fitz Simmons, N. N., Formia, A., Girondot, M., Hays, G. C., Cheng, I. J., Kaska, Y., Lewison, R., Mortimer, J. A., Nichols, W. J., Reina, R. D., Shanker, K. ... Godley, B. J. (2010). Global research priorities for sea turtles: Informing management and conservation in the 21st century. Endangered Species Research, 11 (3), 245-269. doi: 10.3354/esr00279
Richards, Russell G. and Chaloupka, Milani (2009). Temperature-dependent bioaccumulation of copper in an estuarine oyster. Science of the Total Environment, 407 (22), 5901-5906. doi: 10.1016/j.scitotenv.2009.07.039
Chaloupka, Milani, Balazs, George H. and Work, Thirry M. (2009). Rise and fall over 26 years of a marine epizootic in Hawaiian green sea turtles. Journal of Wildlife Diseases, 45 (4), 1138-1142. doi: 10.7589/0090-3558-45.4.1138
Kubis, Stacy, Chaloupka, Milani, Ehrhart, Llewellyn and Bresette, Michael (2009). Growth rates of juvenile green turtles Chelonia mydas from three ecologically distinct foraging habitats along the east central coast of Florida, USA. Marine Ecology Progress Series, 389, 257-269. doi: 10.3354/meps08206
Whiting, Andrea U., Thomson, Allan, Chaloupka, Milani and Limpus, Colin J. (2009). Seasonality, abundance and breeding biology of one of the largest populations of nesting flatback turtles, Natator depressus: Cape Domett, Western Australia. Australian Journal of Zoology, 56 (5), 297-303. doi: 10.1071/ZO08038
Gilman, Eric, Kobayashi, Donald and Chaloupka, Milani (2008). Reducing seabird bycatch in the Hawaii longline tuna fishery. Endangered Species Research, 5 (2-3), 309-323. doi: 10.3354/esr00133
Whiting, Andrea U., Chaloupka, Milani and Limpus, Colin J. (2008). Sampling error for hatchling turtle measurements: Probing a rule-of-thumb. Copeia, 2008 (4), 889-896. doi: 10.1643/CH-07-194
Chaloupka, Milani, Work, Thierry M., Balazs, George H., Murakawa, Shawn K. K. and Morris, Robert (2008). Cause-specific temporal and spatial trends in green sea turtle strandings in the Hawaiian Archipelago (1982-2003). Marine Biology, 154 (5), 887-898. doi: 10.1007/s00227-008-0981-4
Chaloupka, Milani, Kamezaki, Naoki and Limpus, Colin (2008). Is climate change affecting the population dynamics of the endangered Pacific loggerhead sea turtle?. Journal of Experimental Marine Biology and Ecology, 356 (1-2), 136-143. doi: 10.1016/j.jembe.2007.12.009
Chaloupka, Milani, Bjorndal, Karen A., Balazs, George H., Bolten, Alan B., Ehrhart, Llewellyn M., Limpus, Colin J., Suganuma, Hiroyuki, Troeeng, Sebastian and Yamaguchi, Manami (2008). Encouraging outlook for recovery of a once severely exploited marine megaherbivore. Global Ecology and Biogeography, 17 (2), 297-304. doi: 10.1111/j.1466-8238.2007.00367.x
Richards, R. G. and Chaloupka, M. (2008). Does oyster size matter for modelling trace metal bioaccumulation?. Science of The Total Environment, 389 (2-3), 539-544. doi: 10.1016/j.scitotenv.2007.08.060
Robinson, J., Clouston, E., Suh, J. and Chaloupka, M. (2008). Are citizens' juries a useful tool for assessing environmental value?. Environmental Conservation, 35 (4), 351-360. doi: 10.1017/S0376892908005213
Troeng, S. and Chaloupka, M. (2007). Variation in adult annual survival probability and remigration intervals of sea turtles. Marine Biology, 151 (5), 1721-1730. doi: 10.1007/s00227-007-0611-6
Chaloupka, M. and Balazs, G. (2007). Using Bayesian state-space modelling to assess the recovery and harvest potential of the Hawaiian green sea turtle stock. Ecological Modelling, 205 (1-2), 93-109. doi: 10.1016/j.ecolmodel.2007.02.010
Zug, George R., Chaloupka, Milani and Balazs, George H. (2006). Age and growth in olive ridley seaturtles (Lepidochelys olivacea) from the north-central Pacific: a skeletochronological analysis. Marine Ecology, 27 (3), 263-270. doi: 10.1111/j.1439-0485.2006.00109.x
Balazs, George H. and Chaloupka, Milani (2006). Recovery trend over 32 years at the Hawaiian green turtle rookery of French frigate shoals. Atoll Research Bulletin (543), 147-158.
Chaloupka, Milani and Balazs, George (2005). Modelling the effect of fibropapilloma disease on the somatic growth dynamics of Hawaiian green sea turtles. Marine Biology, 147 (5), 1251-1260. doi: 10.1007/s00227-005-0026-1
Chaloupka, Milani and Limpus, Colin (2005). Estimates of sex- and age-class-specific survival probabilities for a southern Great Barrier Reef green sea turtle population. Marine Biology, 146 (6), 1251-1261. doi: 10.1007/s00227-004-1512-6
Dutton, Donna L., Dutton, Peter H., Chaloupka, Milani and Boulon, Rafe H. (2005). Increase of a Caribbean leatherback turtle Dermochelys coriacea nesting population linked to long-term nest protection. Biological Conservation, 126 (2), 186-194. doi: 10.1016/j.biocon.2005.05.013
Chaloupka, Milani, Parker, Denise and Balazs, George (2004). Modelling post-release mortality of loggerhead sea turtles exposed to the Hawaii-based pelagic longline fishery. Marine Ecology Progress Series, 280, 285-293. doi: 10.3354/meps280285
Balazs, G. H. and Chaloupka, M. (2004). Spatial and temporal variability in somatic growth of green sea turtles (Chelonia mydas) resident in the Hawaiian Archipelago. Marine Biology, 145 (5), 1043-1059. doi: 10.1007/s00227-004-1387-6
Chaloupka, Milani, Limpus, Colin and Miller, Jeffrey (2004). Green turtle somatic growth dynamics in a spatially disjunct Great Barrier Reef metapopulation. Coral Reefs, 23 (3), 325-335. doi: 10.1007/s00338-004-0387-9
Balazs, George H. and Chaloupka, Milani (2004). Thirty-year recovery trend in the once depleted Hawaiian green sea turtle stock. Biological Conservation, 117 (5), 491-498. doi: 10.1016/j.biocon.2003.08.008
Bjorndal, Karen A., Bolten, Alan B. and Chaloupka, Milani Y. (2003). Survival probability estimates for immature green turtles Chelonia mydas in the Bahamas. Marine Ecology Progress Series, 252, 273-281. doi: 10.3354/meps252273
Chaloupka, Milani, Osmond, Michael and Kaufman, Greg (1999). Estimating seasonal abundance trends and survival probabilities of humpback whales in Hervey Bay (east coast Australia). Marine Ecology Progress Series, 184, 291-301. doi: 10.3354/meps184291
Conference Paper
Richards, Russell G., Tomlinson, Rodger Benson and Chaloupka, Milani (2010). Using generalized additive models to assess, explore and unify environmental monitoring datasets. iEMSs 2010: 5th Biennial Conference of the International Environmental Modelling and Software Society, Ottawa, ON, Canada, 5-8 July, 2010. Manno, Switzerland: International Environmental Modelling and Software Society (iEMSs).
Research Report
Desbiens, Amelia, Roff, George, Razak, Tries B., Wolfe, Kennedy, Emslie, Michael J., Hoey, Andrew, Kennedy, Emma V., Thompson, Angus, Adams, Matthew P., Baird, Mark, Chaloupka, Milani, Diaz-Pulido, Guillermo, Mongin, Mathieu and Mumby, Peter J. (2021). Integrative carbonate budget model of the Great Barrier Reef. Cairns, QLD Australia: Reef and Rainforest Research Centre.
Theses
Chaloupka, Milani (2000). Modelling sea turtle growth, survivorship and population dynamics. PhD Thesis, School of Biological Sciences, The University of Queensland. doi: 10.14264/365936
Chaloupka, M. (2000). Modelling Sea Turtle Growth, Survivorship and Population Dynamics. PhD Thesis, School of Integrative Biology, The University of Queensland.